Parental gene:

ENSECAG00000015618

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:15:71672691..71681341(+)


>ENSECAG00000015618
ATGGCGATGCAAGCGGCCAAGAGGGCGAATATTCGACTTCCACCTGAAGTAAACCGGATTTTGTATATAAGAAATTTGCC
ATACAAAATCACAGCTGAAGAAATGTATGATATATTTGGAAAATATGGACCTATTCGTCAAATCAGAGTGGGAAACACAC
CTGAAACTAGAGGAACAGCTTATGTGGTCTATGAAGACATCTTTGATGCCAAGAACGCGTGTGATCACCTGTCAGGATTC
AATGTGTGTAACAGATACCTCGTGGTTTTGTACTATAATGCCAACAGGGCATTTCAGAAGATGGACACAAAGAAGAAGGA
AGAACAGTTGAAGCTTCTCAAGGAGAAATATGGCATCAACACAGATCCACCAAAGTAA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 13 .75 RPM
SRP021940_cerebellum 30 .22 RPM
SRP021940_embryo 34 .68 RPM
SRP021940_placental_villous 32 .67 RPM
SRP021940_synovial_membrane 17 .90 RPM
SRP021940_testis 24 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002786 ortholog_one2one 1 retrogene
retro_amel_1594,
Bos taurus ENSBTAG00000003407 ortholog_one2one 1 retrogene
retro_btau_606,
Choloepus hoffmanni ENSCHOG00000000689 ortholog_one2one 3 retrogenes
retro_chof_1217, retro_chof_2457, retro_chof_351,
Callithrix jacchus ENSCJAG00000007716 ortholog_one2one 2 retrogenes
retro_cjac_2632, retro_cjac_487,
Dasypus novemcinctus ENSDNOG00000007148 ortholog_one2one 1 retrogene
retro_dnov_1313,
Felis catus ENSFCAG00000031365 ortholog_one2one 1 retrogene
retro_fcat_247,
Homo sapiens ENSG00000115128 ortholog_one2one 1 retrogene
retro_hsap_1773,
Macaca mulatta ENSMMUG00000001282 ortholog_one2one 1 retrogene
retro_mmul_1262,
Mustela putorius furo ENSMPUG00000013957 ortholog_one2one 1 retrogene
retro_mputfur_882,
Nomascus leucogenys ENSNLEG00000000815 ortholog_one2one 1 retrogene
retro_nleu_2806,
Otolemur garnettii ENSOGAG00000004468 ortholog_one2one 1 retrogene
retro_ogar_2877,
Pongo abelii ENSPPYG00000012603 ortholog_one2one 2 retrogenes
retro_pabe_1098, retro_pabe_1461,
Pan troglodytes ENSPTRG00000011709 ortholog_one2one 1 retrogene
retro_ptro_1187,
Sorex araneus ENSSARG00000011902 ortholog_one2one 1 retrogene
retro_sara_638,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_733 89.60 100.00
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Download FASTA sequences of all ENSECAG00000015618 retrocopies