Parental gene:

AK3, ENSECAG00000011235

Aliases:None
Description:adenylate kinase 3 [Source:HGNC Symbol;Acc:17376]
Organism:Horse (Equus caballus)
Coordinates:23:26225032..26232058(-)


>ENSECAG00000011235
TCTGCTGTAGAAATTGGTGTGTTAGCCAAGACTTTCATTGACCAAGGGAAGCTCATCCCAGATGATGTCATGACTCGGCT
GGCCCTTCATGAGCTGAAAAATCTCACCCAACATAGCTGGCTGTTGGATGGTTTTCCAAGGACACTTCCACAGGCAGAAG
CCCTGGATAAAGCGTATCAGATAGACACAGTGATTAATCTGAATGTGCCCTTTGAAGTCATTCAGCACCGCCTCACTGCC
CGCTGGATTCATCCAGCCAGCGGCCGAGTCTACAACATGGAATTCAACCCTCCCAAAACACTGGGTGTTGATGATGTGAC
TGGAGAGCCTCTCGTTCAGCGGGAGGATGACAAACCAGAGACAGTTGTCAAGAGGCTGAAGGCCTACGAGGCGCAAACAA
AGCCGGTCCTGGATTACTACCAGAAAAAAGGGGTGTTGGAAACATTCTCTGGAACAGAAACCAACAAGATCTGGCCTCAT
GTATATGCTTTCCTACAAACAAAAGTTCCACAAGTAAACCAGGAAGCATCAGTTACTCCATGA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 5 .19 RPM
SRP021940_cerebellum 6 .60 RPM
SRP021940_embryo 15 .83 RPM
SRP021940_placental_villous 86 .22 RPM
SRP021940_synovial_membrane 23 .86 RPM
SRP021940_testis 4 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002640 ortholog_one2one 3 retrogenes
retro_amel_1009, retro_amel_1916, retro_amel_1931,
Bos taurus ENSBTAG00000017147 ortholog_one2one 1 retrogene
retro_btau_323,
Callithrix jacchus ENSCJAG00000011188 ortholog_one2many 1 retrogene
retro_cjac_1940,
Echinops telfairi ENSETEG00000000829 ortholog_one2one 1 retrogene
retro_etel_57,
Felis catus ENSFCAG00000028063 ortholog_one2one 2 retrogenes
retro_fcat_162, retro_fcat_1982,
Homo sapiens ENSG00000147853 ortholog_one2one 3 retrogenes
retro_hsap_1163, retro_hsap_3228, retro_hsap_555,
Gorilla gorilla ENSGGOG00000028122 ortholog_one2one 3 retrogenes
retro_ggor_2195, retro_ggor_503, retro_ggor_908,
Loxodonta africana ENSLAFG00000001126 ortholog_one2one 1 retrogene
retro_lafr_205,
Microcebus murinus ENSMICG00000013112 ortholog_one2one 3 retrogenes
retro_mmur_1474, retro_mmur_1559, retro_mmur_1579,
Myotis lucifugus ENSMLUG00000017272 ortholog_one2one 1 retrogene
retro_mluc_535,
Macaca mulatta ENSMMUG00000000143 ortholog_one2many 2 retrogenes
retro_mmul_2032, retro_mmul_898,
Mustela putorius furo ENSMPUG00000005006 ortholog_one2one 2 retrogenes
retro_mputfur_1163, retro_mputfur_890,
Nomascus leucogenys ENSNLEG00000008885 ortholog_one2one 3 retrogenes
retro_nleu_2638, retro_nleu_2653, retro_nleu_948,
Oryctolagus cuniculus ENSOCUG00000011411 ortholog_one2one 1 retrogene
retro_ocun_716,
Otolemur garnettii ENSOGAG00000007477 ortholog_one2one 2 retrogenes
retro_ogar_3482, retro_ogar_3492,
Pongo abelii ENSPPYG00000019245 ortholog_one2one 3 retrogenes
retro_pabe_2676, retro_pabe_3588, retro_pabe_967,
Pan troglodytes ENSPTRG00000020742 ortholog_one2one 5 retrogenes
retro_ptro_1785, retro_ptro_2180, retro_ptro_2895, retro_ptro_416, retro_ptro_796,
Pteropus vampyrus ENSPVAG00000015751 ortholog_one2one 1 retrogene
retro_pvam_269,
Sus scrofa ENSSSCG00000023595 ortholog_one2one 1 retrogene
retro_sscr_641,
Ictidomys tridecemlineatus ENSSTOG00000000021 ortholog_one2one 1 retrogene
retro_itri_933,
Tupaia belangeri ENSTBEG00000008054 ortholog_one2one 3 retrogenes
retro_tbel_1463, retro_tbel_3247, retro_tbel_3397,
Tursiops truncatus ENSTTRG00000016524 ortholog_one2one 1 retrogene
retro_ttru_1036,
Vicugna pacos ENSVPAG00000009187 ortholog_one2one 1 retrogene
retro_vpac_137,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_317 71.19 65.56
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2. retro_ecab_914 64.81 58.89
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Download FASTA sequences of all ENSECAG00000011235 retrocopies