RetrogeneDB - Parental gene ENSDNOG00000019446 details

Parental gene:	SNRPG, ENSDNOG00000019446
Aliases:	None
Description:	small nuclear ribonucleoprotein polypeptide G [Source:HGNC Symbol;Acc:11163]
Organism:	*Armadillo (Dasypus novemcinctus)*
Coordinates:	scaffold_7965:14044..20208(-)

                            
>ENSDNOG00000019446
ATGAGCAAAGCTCACCCACCCGAGTTGAAAAAATTTATGGACAAGAAGTTATCATTGAAATTAAATGGTGGCAGACATGT

CCAAGGAATATTGAGAGGATTTGATCCCTTTATGAATCTTGTGATAGATGAGTGTGTGGAGATGGCAACTAGTGGGCAAC

AGAACAATATTGGAATGGTGGTAATACGAGGAAATAGTATCATCATGTTAGAAGCCTTGGAACGAGTATAA

Library	Parental gene expression (RPM)
SRP012922_ascending_colon	37 .34 RPM
SRP012922_cerebellum	15 .67 RPM
SRP012922_heart	21 .81 RPM
SRP012922_kidney	22 .73 RPM
SRP012922_liver	15 .64 RPM
SRP012922_lung	30 .24 RPM
SRP012922_quadricep_muscle	12 .29 RPM
SRP012922_spleen	37 .54 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Callithrix jacchus	ENSCJAG00000019313	possible_ortholog	18 retrogenes	retro_cjac_1034, retro_cjac_1227, retro_cjac_1398, retro_cjac_149, retro_cjac_1897, retro_cjac_223, retro_cjac_2419, retro_cjac_2431, retro_cjac_2658, retro_cjac_2795, retro_cjac_3246, retro_cjac_3314, retro_cjac_4078, retro_cjac_547, retro_cjac_763, retro_cjac_796, retro_cjac_897, retro_cjac_998,
Felis catus	ENSFCAG00000008118	possible_ortholog	8 retrogenes	retro_fcat_1006, retro_fcat_1092, retro_fcat_1248, retro_fcat_1467, retro_fcat_1893, retro_fcat_562, retro_fcat_82, retro_fcat_90,
Microcebus murinus	ENSMICG00000015369	possible_ortholog	10 retrogenes	retro_mmur_1419, retro_mmur_1468, retro_mmur_1550, retro_mmur_265, retro_mmur_395, retro_mmur_59, retro_mmur_595, retro_mmur_625, retro_mmur_735, retro_mmur_901,
Myotis lucifugus	ENSMLUG00000026490	possible_ortholog	3 retrogenes	retro_mluc_273, retro_mluc_46, retro_mluc_731,
Macaca mulatta	ENSMMUG00000007961	ortholog_one2many	3 retrogenes	retro_mmul_1021, retro_mmul_2048, retro_mmul_300,
Monodelphis domestica	ENSMODG00000011528	ortholog_one2one	1 retrogene	retro_mdom_1945,
Mustela putorius furo	ENSMPUG00000007221	possible_ortholog	2 retrogenes	retro_mputfur_100, retro_mputfur_114,
Mus musculus	ENSMUSG00000057278	possible_ortholog	1 retrogene	retro_mmus_186,
Nomascus leucogenys	ENSNLEG00000010182	possible_ortholog	1 retrogene	retro_nleu_93,
Oryctolagus cuniculus	ENSOCUG00000011214	possible_ortholog	2 retrogenes	retro_ocun_1032, retro_ocun_57,
Pongo abelii	ENSPPYG00000012324	possible_ortholog	14 retrogenes	retro_pabe_1054, retro_pabe_1078, retro_pabe_1079, retro_pabe_1169, retro_pabe_1188, retro_pabe_1465, retro_pabe_1603, retro_pabe_1728, retro_pabe_1929, retro_pabe_2041, retro_pabe_2160, retro_pabe_3093, retro_pabe_495, retro_pabe_95,
Rattus norvegicus	ENSRNOG00000016507	possible_ortholog	1 retrogene	retro_rnor_409,
Sus scrofa	ENSSSCG00000024776	ortholog_one2one	1 retrogene	retro_sscr_907,
Ictidomys tridecemlineatus	ENSSTOG00000008654	possible_ortholog	11 retrogenes	retro_itri_1116, retro_itri_1260, retro_itri_128, retro_itri_1395, retro_itri_1871, retro_itri_280, retro_itri_353, retro_itri_572, retro_itri_589, retro_itri_910, retro_itri_947,
Tupaia belangeri	ENSTBEG00000017381	ortholog_one2one	66 retrogenes	retro_tbel_1010, retro_tbel_1076, retro_tbel_1114, retro_tbel_1133, retro_tbel_1161, retro_tbel_1164, retro_tbel_1174, retro_tbel_121, retro_tbel_1288, retro_tbel_1448, retro_tbel_1461, retro_tbel_147, retro_tbel_1478, retro_tbel_149, retro_tbel_164, retro_tbel_1654, retro_tbel_1887, retro_tbel_1939, retro_tbel_1944, retro_tbel_1965, retro_tbel_1966, retro_tbel_1997, retro_tbel_2001, retro_tbel_2143, retro_tbel_217, retro_tbel_236, retro_tbel_239, retro_tbel_241, retro_tbel_2454, retro_tbel_2462, retro_tbel_2572, retro_tbel_2664, retro_tbel_2941, retro_tbel_3098, retro_tbel_3379, retro_tbel_3385, retro_tbel_343, retro_tbel_347, retro_tbel_3495, retro_tbel_3559, retro_tbel_3603, retro_tbel_362, retro_tbel_3699, retro_tbel_3980, retro_tbel_3981, retro_tbel_3983, retro_tbel_4010, retro_tbel_4011, retro_tbel_4177, retro_tbel_4196, retro_tbel_43, retro_tbel_4399, retro_tbel_4442, retro_tbel_4505, retro_tbel_4549, retro_tbel_4609, retro_tbel_465, retro_tbel_489, retro_tbel_697, retro_tbel_726, retro_tbel_736, retro_tbel_805, retro_tbel_921, retro_tbel_93, retro_tbel_936, retro_tbel_947,
Vicugna pacos	ENSVPAG00000007452	possible_ortholog	10 retrogenes	retro_vpac_182, retro_vpac_196, retro_vpac_25, retro_vpac_290, retro_vpac_295, retro_vpac_352, retro_vpac_42, retro_vpac_59, retro_vpac_591, retro_vpac_641,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_dnov_221	72.86	90.79	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_dnov_249	94.59	97.37	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_dnov_269	94.52	96.05	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_dnov_272	78.95	97.37	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_dnov_435	76.71	96.05	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_dnov_518	86.67	97.37	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_dnov_520	90.79	100.00	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_dnov_564	78.67	97.37	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_dnov_647	72.97	96.05	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_dnov_883	78.38	97.37	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_dnov_1104	84.42	100.00	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_dnov_1138	90.79	100.00	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_dnov_1150	75.64	100.00	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_dnov_1207	88.00	98.68	Please wait, loading	Please wait, loading	Please wait, loading
15.	retro_dnov_1232	90.79	100.00	Please wait, loading	Please wait, loading	Please wait, loading
16.	retro_dnov_1297	75.64	100.00	Please wait, loading	Please wait, loading	Please wait, loading
17.	retro_dnov_2273	91.89	97.37	Please wait, loading	Please wait, loading	Please wait, loading
18.	retro_dnov_2295	88.16	100.00	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSDNOG00000019446 retrocopies

Parental gene:

SNRPG, ENSDNOG00000019446