Parental gene: | ENSDNOG00000017624 |
| Aliases: | None |
| Description: | None |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_33548:989..7773(-) |
>ENSDNOG00000017624
ATGGCACCCTTTGGAAGAAAGCATACCGAGAAATCTGTGAAGCCAGCAATGGAGGATCAGGTTATACGAGTTTATGACTT
TGGAAAAGAAGACAAGAAAGATCTGGATGGCTCAGAGGAGGGTATTGTAGAAGAAAAGTTTCCAGTAATTGATAAGCATG
GAAAGAAAAGGCCTTGCACTGAAATGATTGAGACAGATATGGGGGGTGAAGTACACAATATGTTGGAAAGATTTGGAGCT
GACATTAACAAGACTCTTCTTGCAAAGAGAAAAAGATTGGAAGTGTATACCAAAGCTTCACTCAAAACCAGTAACCAGAA
AATTGAACATTTTTGGAAAGTACAACAAGAACAAAGGCAGAAACTTAACCAAGAATACTCTCAGCAGTTTTTGACCCTGT
TTCAGCAGTGGGAGGTAGATGTGCAGAAAGCTGAGGAACAAGAAGAAAAATTAGCTAACATTTTTCGACAGCAACAAAAG
ATTTTTCAACAATCTAGAATTGTTCAGAGCCAGAGACTGAAAGCAATTAAACAGCTGTATGAGCAGTTCGTAAAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 1 .36 RPM |
| SRP012922_cerebellum | 13 .06 RPM |
| SRP012922_heart | 0 .70 RPM |
| SRP012922_kidney | 0 .55 RPM |
| SRP012922_liver | 0 .00 RPM |
| SRP012922_lung | 1 .83 RPM |
| SRP012922_quadricep_muscle | 0 .00 RPM |
| SRP012922_spleen | 2 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013389 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001658 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000001202 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000017387 | within_species_paralog | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000007664 | ortholog_many2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010711 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000067764 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000072479 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000024543 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000017224 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000001853 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_420 | 74.17 | 62.16 | Please wait, loading  |
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| 2. | retro_dnov_2294 | 56.31 | 55.14 | Please wait, loading |
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| 3. | retro_dnov_2402 | 51.59 | 83.78 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000017624 retrocopies