Parental gene:

SYCP3, ENSCHOG00000013389

Aliases:None
Description:synaptonemal complex protein 3 [Source:HGNC Symbol;Acc:18130]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_1998:17893..25863(-)


>ENSCHOG00000013389
AAGACTCCAGTAACTGATAGGCATGGTAAAAAAAGACCGTCTGCACGGACAATTGAGGAAGAAGTGGGGGGTGAAGTACA
CAGTATGTTGGAAAAATTGGGAGCTGACATTAACAAGGCTCTTCTTGCAAAGAGAAAAAGATTGGAAATGTATACCAGGG
CTTCTCTGAAAACCAGTAACCAGAAAATTGAAAATGTTTGGAAAGCACAACAAGAGCAAAGGCAGAAACTTAACCAAGAA
TATTCTCAGCAGTTTCTGACTCTGTTTGAGCAGTGGGATATAGATATGCAAAAAGCTGAGGAACAAGAAGAAAAATTAGC
TAATATGTTTCGACAGCAACAAAAGGTTTTTCAGCAATCTAGAATTGTTCAGAGCCAGAGACTGAAAACAATTAAACAGT
TGTTTGAGCAGTTCGTAAAGAGCGTGGAGGACTTGGAGAAGAATCATGAAAGTCGTCTTACTGGTGTACAAAATGAACTT
AGAAAAGAAATGGCTATATTGCAAAAAAGAATTATGATGGACACTCAGCAACAAGAGATGGCAAGTGTTCGAAAGTCTCT
TCAATCCATGTTATTCTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001658 ortholog_one2one 1 retrogene
retro_cjac_2710,
Cavia porcellus ENSCPOG00000001202 ortholog_one2one 1 retrogene
retro_cpor_686,
Dasypus novemcinctus ENSDNOG00000017387 possible_ortholog 2 retrogenes
retro_dnov_2623, retro_dnov_739,
Dasypus novemcinctus ENSDNOG00000017624 ortholog_one2many 3 retrogenes
retro_dnov_2294, retro_dnov_2402, retro_dnov_420,
Echinops telfairi ENSETEG00000007664 ortholog_one2many 1 retrogene
retro_etel_1510,
Myotis lucifugus ENSMLUG00000010711 ortholog_one2one 2 retrogenes
retro_mluc_1098, retro_mluc_1839,
Mus musculus ENSMUSG00000067764 possible_ortholog 1 retrogene
retro_mmus_1085,
Mus musculus ENSMUSG00000072479 possible_ortholog 1 retrogene
retro_mmus_1782,
Otolemur garnettii ENSOGAG00000024543 ortholog_one2one 1 retrogene
retro_ogar_633,
Rattus norvegicus ENSRNOG00000017224 possible_ortholog 1 retrogene
retro_rnor_1728,
Ictidomys tridecemlineatus ENSSTOG00000001853 ortholog_one2one 1 retrogene
retro_itri_931,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_1384 88.02 100.00
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2. retro_chof_2693 73.45 58.85
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Download FASTA sequences of all ENSCHOG00000013389 retrocopies