Parental gene:

UBE2D1, ENSDNOG00000013821

Aliases:None
Description:ubiquitin-conjugating enzyme E2D 1 [Source:HGNC Symbol;Acc:12474]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6585:578..64489(+)


>ENSDNOG00000013821
ATGGCGCTGAAGCGGATTCAGAAAGAATTGAGTGATCTGCAACGTGATCCACCTGCTCACTGTTCAGCTGGACCTGTGGG
AGATGACTTGTTCCACTGGCAAGCAACTATTATGGGCCCTCCTGATAGTACATACCAAGGTGGAGTCTTTTTTCTAACGC
TACATTTTCTGACAGACTACCCTTTTAAGCCACCAAACTTTGCTTTCACAACAAAAATTTGCCATCCAAACATAAGTCGT
GAGAGTATTTGTCTTACTCTCCTGAGGTCACAGTGGTCACCAGCTCTGACTTTACCAAAATATAACCATGAATGGACTCA
AAAATATGCAATGTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 0 .39 RPM
SRP012922_cerebellum 0 .96 RPM
SRP012922_heart 2 .32 RPM
SRP012922_kidney 0 .00 RPM
SRP012922_liver 0 .15 RPM
SRP012922_lung 1 .22 RPM
SRP012922_quadricep_muscle 1 .38 RPM
SRP012922_spleen 1 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020796 ortholog_one2one 5 retrogenes
retro_btau_1174, retro_btau_1314, retro_btau_1773, retro_btau_1774, retro_btau_752,
Choloepus hoffmanni ENSCHOG00000001213 ortholog_one2many 21 retrogenes
retro_chof_1091, retro_chof_1169, retro_chof_1465, retro_chof_1675, retro_chof_1731, retro_chof_2071, retro_chof_2089, retro_chof_2098, retro_chof_2101, retro_chof_2190, retro_chof_2266, retro_chof_2364, retro_chof_2481, retro_chof_2485, retro_chof_2514, retro_chof_2637, retro_chof_619, retro_chof_662, retro_chof_683, retro_chof_728, retro_chof_920,
Dasypus novemcinctus ENSDNOG00000005448 other_paralog 7 retrogenes
retro_dnov_1217, retro_dnov_1281, retro_dnov_1360, retro_dnov_156, retro_dnov_2026, retro_dnov_2508, retro_dnov_424,
Dasypus novemcinctus ENSDNOG00000009320 within_species_paralog 30 retrogenes
retro_dnov_1061, retro_dnov_1125, retro_dnov_113, retro_dnov_114, retro_dnov_1167, retro_dnov_1193, retro_dnov_1198, retro_dnov_1257, retro_dnov_141, retro_dnov_1544, retro_dnov_1752, retro_dnov_1761, retro_dnov_1831, retro_dnov_1862, retro_dnov_1912, retro_dnov_1934, retro_dnov_1995, retro_dnov_2084, retro_dnov_2135, retro_dnov_2289, retro_dnov_2362, retro_dnov_2457, retro_dnov_2622, retro_dnov_436, retro_dnov_574, retro_dnov_750, retro_dnov_795, retro_dnov_83, retro_dnov_889, retro_dnov_917,
Echinops telfairi ENSETEG00000002280 ortholog_one2one 2 retrogenes
retro_etel_1363, retro_etel_1600,
Homo sapiens ENSG00000072401 ortholog_one2one 2 retrogenes
retro_hsap_4723, retro_hsap_4725,
Macropus eugenii ENSMEUG00000007238 ortholog_one2many 1 retrogene
retro_meug_1090,
Microcebus murinus ENSMICG00000010253 ortholog_one2one 1 retrogene
retro_mmur_586,
Myotis lucifugus ENSMLUG00000005710 ortholog_one2one 13 retrogenes
retro_mluc_1019, retro_mluc_1597, retro_mluc_1855, retro_mluc_1914, retro_mluc_1971, retro_mluc_2053, retro_mluc_650, retro_mluc_687, retro_mluc_703, retro_mluc_778, retro_mluc_803, retro_mluc_867, retro_mluc_878,
Mus musculus ENSMUSG00000019927 ortholog_one2one 22 retrogenes
retro_mmus_3405, retro_mmus_3406, retro_mmus_3407, retro_mmus_3409, retro_mmus_3430, retro_mmus_3432, retro_mmus_3434, retro_mmus_3435, retro_mmus_3436, retro_mmus_3563, retro_mmus_3564, retro_mmus_3565, retro_mmus_3566, retro_mmus_3567, retro_mmus_3587, retro_mmus_3589, retro_mmus_3590, retro_mmus_3591, retro_mmus_3592, retro_mmus_3593, retro_mmus_3594, retro_mmus_3595,
Procavia capensis ENSPCAG00000006998 ortholog_one2one 1 retrogene
retro_pcap_117,
Pteropus vampyrus ENSPVAG00000007394 ortholog_one2one 2 retrogenes
retro_pvam_1139, retro_pvam_363,
Sarcophilus harrisii ENSSHAG00000010481 ortholog_one2one 1 retrogene
retro_shar_714,
Tarsius syrichta ENSTSYG00000011229 ortholog_one2one 3 retrogenes
retro_tsyr_1217, retro_tsyr_1430, retro_tsyr_501,
Tursiops truncatus ENSTTRG00000009244 ortholog_one2one 8 retrogenes
retro_ttru_137, retro_ttru_1649, retro_ttru_1670, retro_ttru_1793, retro_ttru_1853, retro_ttru_376, retro_ttru_443, retro_ttru_96,
Vicugna pacos ENSVPAG00000006944 ortholog_one2one 5 retrogenes
retro_vpac_343, retro_vpac_513, retro_vpac_561, retro_vpac_585, retro_vpac_587,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_537 58.14 77.48
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Download FASTA sequences of all ENSDNOG00000013821 retrocopies