Parental gene:

RRAS2, ENSDNOG00000011828

Aliases:None
Description:related RAS viral (r-ras) oncogene homolog 2 [Source:HGNC Symbol;Acc:17271]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_3044:4262..25560(-)


>ENSDNOG00000011828
ATGGCCGTGACTGGCTGGCGGGATGGCTCCGGCCAGGAGAGGTACCGGCTGGTGTTGGTCGGCGGGGGCGGCGGGGGCAA
ATTGACACTCATGATCTTCATCCAGNNNNNNNNNGTGACGGATTATGATCCAACCATTGAAGATTCGTATACAAAGCTGT
GTGTGATAGATGACAGAGCAGCCCGGCTAGATATTCTGGATACAGCAGGGCAAGAAGAGTTTGGAGCTATGAGAGAACAG
TATATGAGGACTGGCGAGGGTTTCCTGTTGGTCTTTTCAGTCACAGATAGAGGCAGTTGGGAAGACATCTATAAGCTTAG
GCAGATTCTCAGAGTAAGGAACCCTGATGAATTTCCGATGATGTTAATTGGTAACAAAGCAGATGTAGATCATCAGAGGA
GGGTAACCCAGGAAGAAGGGCAGCAGTTAGCACGGCAGCTGAAGGTAACATACATGGAGGCCTCAGCAAAGATTAGGATG
AATGTAGATCAAGCTTTCCATGAACTTGTCCGGGTTATAAGGAAATTTCAAGAGCAGGAATGTCCTCCTTCACCAGAACC
AACACGAAAAGAAAAAGACAAGAAAGGCTGCCATTGTGTCATTTTCTAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 4 .47 RPM
SRP012922_cerebellum 4 .81 RPM
SRP012922_heart 2 .32 RPM
SRP012922_kidney 4 .65 RPM
SRP012922_liver 3 .41 RPM
SRP012922_lung 19 .09 RPM
SRP012922_quadricep_muscle 3 .12 RPM
SRP012922_spleen 21 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002367 ortholog_one2one 1 retrogene
retro_amel_947,
Bos taurus ENSBTAG00000011905 ortholog_one2one 1 retrogene
retro_btau_1295,
Choloepus hoffmanni ENSCHOG00000003135 ortholog_one2one 7 retrogenes
retro_chof_111, retro_chof_1639, retro_chof_2065, retro_chof_2644, retro_chof_2706, retro_chof_389, retro_chof_521,
Erinaceus europaeus ENSEEUG00000000240 ortholog_one2one 1 retrogene
retro_eeur_531,
Felis catus ENSFCAG00000009578 ortholog_one2one 1 retrogene
retro_fcat_386,
Homo sapiens ENSG00000133818 ortholog_one2one 1 retrogene
retro_hsap_390,
Gorilla gorilla ENSGGOG00000004759 ortholog_one2many 1 retrogene
retro_ggor_1813,
Myotis lucifugus ENSMLUG00000007005 ortholog_one2one 1 retrogene
retro_mluc_1264,
Macaca mulatta ENSMMUG00000000664 ortholog_one2one 2 retrogenes
retro_mmul_1604, retro_mmul_965,
Monodelphis domestica ENSMODG00000028397 ortholog_one2one 2 retrogenes
retro_mdom_1254, retro_mdom_577,
Oryctolagus cuniculus ENSOCUG00000011362 ortholog_one2one 1 retrogene
retro_ocun_1645,
Otolemur garnettii ENSOGAG00000027655 ortholog_one2one 1 retrogene
retro_ogar_1081,
Ochotona princeps ENSOPRG00000005967 ortholog_one2one 1 retrogene
retro_opri_2,
Pongo abelii ENSPPYG00000025912 ortholog_one2one 1 retrogene
retro_pabe_3043,
Pan troglodytes ENSPTRG00000003383 ortholog_one2one 2 retrogenes
retro_ptro_1747, retro_ptro_301,
Rattus norvegicus ENSRNOG00000012258 ortholog_one2one 1 retrogene
retro_rnor_750,
Ictidomys tridecemlineatus ENSSTOG00000022169 ortholog_one2one 1 retrogene
retro_itri_1457,
Tupaia belangeri ENSTBEG00000001292 ortholog_one2one 1 retrogene
retro_tbel_3234,
Tursiops truncatus ENSTTRG00000010419 ortholog_one2one 1 retrogene
retro_ttru_1218,
Vicugna pacos ENSVPAG00000008814 ortholog_one2one 1 retrogene
retro_vpac_165,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_124 53.91 54.95
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2. retro_dnov_988 67.21 59.90
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3. retro_dnov_1458 65.25 57.43
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4. retro_dnov_1708 63.97 65.84
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5. retro_dnov_1779 63.09 73.27
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6. retro_dnov_2331 50.39 62.38
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Download FASTA sequences of all ENSDNOG00000011828 retrocopies