Parental gene: | THOC7, ENSDNOG00000005917 |
| Aliases: | None |
| Description: | THO complex 7 homolog (Drosophila) [Source:HGNC Symbol;Acc:29874] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_3968:127094..133672(+) |
>ENSDNOG00000005917
ATGAGTTGTGTTATTGCAGACGAAGTCATACGGAAGCGTCTCCTAATTGATGGAGATGGTGCTGGTGATGATCGGAGAAT
TAATCTTCTAGTGAAGAGTTTCATTAAATGGTGCAACTCTGGATCTCAGGAAGAGGGATATAGCCAGTACCAACGTATGC
TGAGTACCCTGTCACAATGTGAATTTTCAATGGGCAAAACCTTGTTGGTATATGACATGAATCTCAGAGAAATGGAAAAT
TATGAAAAAATTTACAAAGAAATAGAATGTAGCATCGCTGGAGCACATGAAAAAATTGCTGAGTGCAAAAAGCAAATTCT
TCAAGCAAAACGAATACGAAAAAATCGCCAAGAATATGATGCTTTAGCAAAAGTGATCCAGCATCATCCAGACAGGCATG
AGACATTAAAGGAACTAGAGGCTCTGGGGAAAGAGCTAGAGCATCTTTCACATATTAAGGAAAGTGTTGAAGATAAGCTG
GAATTGAGACGGAAACAGTTTCATGTGCTTCTTAGCACTATCCACGAACTTCAGCAAACACTGGAAAATGATGAAAAGCT
CTCAGAGGTGGAGGAAGCTCAAGAGACAAGCATGGAAACAAATCCTAAGCCATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 40 .06 RPM |
| SRP012922_cerebellum | 39 .32 RPM |
| SRP012922_heart | 16 .47 RPM |
| SRP012922_kidney | 29 .30 RPM |
| SRP012922_liver | 16 .72 RPM |
| SRP012922_lung | 49 .02 RPM |
| SRP012922_quadricep_muscle | 21 .46 RPM |
| SRP012922_spleen | 32 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012170 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000034899 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000007930 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000001987 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000012060 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000021860 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000024865 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000013894 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000011491 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000007069 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000013618 | ortholog_one2one | 3 retrogenes | |
| Vicugna pacos | ENSVPAG00000010083 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_380 | 74.85 | 79.90 | Please wait, loading  |
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| 2. | retro_dnov_2083 | 65.50 | 82.84 | Please wait, loading |
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| 3. | retro_dnov_2129 | 67.05 | 84.31 | Please wait, loading |
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| 4. | retro_dnov_2335 | 73.33 | 73.04 | Please wait, loading |
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| 5. | retro_dnov_2374 | 65.90 | 84.31 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000005917 retrocopies