Parental gene:

FAM213A, ENSDNOG00000001981

Aliases:None
Description:family with sequence similarity 213, member A [Source:HGNC Symbol;Acc:28651]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_2463:8993..51839(+)


>ENSDNOG00000001981
CCAAGGACCTTCAAAGCAAAGGAACTCTGGGAGAAGAATGGCGCCGTGATCATGGCCGTGCGGAGGCCAGGCTGCTTCCT
GTGTCGAGAGNNNNNNNNNNNNCTGTCCTCCCTCAAGCCCCAGCTGGACGCGCTGAGCATCCCCCTCTACGCCGTGGTAA
AGGAGCAGGTCGGGCATGAAGTGCAGGACTTCCAGCCGTATTTTAAAGGGGAAGTCTTCCTGGATGAAAAGAAGGAGTTC
TACGGTCCCCACAGACGGAAGATGATGCTCCTGGGGTTTGTCCGTTTGGGGGTCTGGTTCAACTTCCTCCGGGCCCGGAA
TGGAGGCTTCTCCGGAAACCTGGAAGGCGAAGGCTTCGTCCTCGGGGGAGTTTTTGTGGTGGGACCAGGAAAGCAGGGCA
TACTTCTCGAGCACCGAGAGAAAGAATTTGGAGACAAAGTAAGTCTAGTTTCTGTTCTGGAAGCTGCTAGAAAGATCGAA
CCACAGACCTCCACCTCTGAGAAGTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 34 .62 RPM
SRP012922_cerebellum 15 .67 RPM
SRP012922_heart 7 .19 RPM
SRP012922_kidney 104 .86 RPM
SRP012922_liver 92 .57 RPM
SRP012922_lung 13 .44 RPM
SRP012922_quadricep_muscle 5 .02 RPM
SRP012922_spleen 74 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000813 ortholog_one2one 1 retrogene
retro_chof_878,
Callithrix jacchus ENSCJAG00000003657 ortholog_one2one 1 retrogene
retro_cjac_3312,
Homo sapiens ENSG00000122378 ortholog_one2one 2 retrogenes
retro_hsap_1135, retro_hsap_4076,
Gorilla gorilla ENSGGOG00000013246 ortholog_one2one 2 retrogenes
retro_ggor_2733, retro_ggor_886,
Microcebus murinus ENSMICG00000007485 ortholog_one2one 2 retrogenes
retro_mmur_1346, retro_mmur_1481,
Macaca mulatta ENSMMUG00000021773 ortholog_one2one 3 retrogenes
retro_mmul_2351, retro_mmul_2409, retro_mmul_881,
Mus musculus ENSMUSG00000021792 ortholog_one2one 1 retrogene
retro_mmus_2227,
Otolemur garnettii ENSOGAG00000013638 ortholog_one2one 7 retrogenes
retro_ogar_2126, retro_ogar_2435, retro_ogar_2562, retro_ogar_3327, retro_ogar_420, retro_ogar_580, retro_ogar_784,
Procavia capensis ENSPCAG00000009696 ortholog_one2one 1 retrogene
retro_pcap_281,
Pongo abelii ENSPPYG00000025862 ortholog_one2one 4 retrogenes
retro_pabe_3345, retro_pabe_643, retro_pabe_738, retro_pabe_944,
Pan troglodytes ENSPTRG00000002685 ortholog_one2one 2 retrogenes
retro_ptro_2763, retro_ptro_774,
Rattus norvegicus ENSRNOG00000011140 ortholog_one2one 1 retrogene
retro_rnor_1517,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_868 74.80 71.43
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_dnov_1843 70.25 72.02
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_dnov_1901 60.71 64.88
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000001981 retrocopies