Parental gene:

LSM6, ENSCPOG00000015389

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_7:20910190..20915674(-)


>ENSCPOG00000015389
ATGAGTCTGCGGAAGCAAACTCCTAGTGACTTCTTAAAGCAAATCATCGGAAGGCCAGTTGTGGTCAAATTAAATTCTGG
AGTGGATTATCGAGGGGTCCTGGCTTGCCTGGATGGCTATATGAATATAGCCCTGGAGCAGACAGAAGAGTATGTAAACG
GACAACTCAAGAATAAGTATGGGGATGCGTTTATCCGAGGAAACAATGTATTGTACATAAGTACACAGAAGAGAAGGATG
TGA

Library Parental gene expression (RPM)
SRP017611_brain 6 .73 RPM
SRP017611_kidney 8 .27 RPM
SRP017611_liver 4 .61 RPM
SRP040447_lung 10 .37 RPM
SRP040447_skeletal_muscle 7 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014060 ortholog_one2one 1 retrogene
retro_btau_861,
Dasypus novemcinctus ENSDNOG00000009322 ortholog_one2one 5 retrogenes
retro_dnov_1118, retro_dnov_176, retro_dnov_2092, retro_dnov_301, retro_dnov_664,
Homo sapiens ENSG00000164167 ortholog_one2one 2 retrogenes
retro_hsap_1948, retro_hsap_2107,
Gorilla gorilla ENSGGOG00000001310 ortholog_one2one 2 retrogenes
retro_ggor_1417, retro_ggor_1638,
Myotis lucifugus ENSMLUG00000026355 ortholog_one2one 1 retrogene
retro_mluc_1859,
Monodelphis domestica ENSMODG00000000526 ortholog_one2one 4 retrogenes
retro_mdom_1027, retro_mdom_1383, retro_mdom_1983, retro_mdom_621,
Nomascus leucogenys ENSNLEG00000005584 ortholog_one2one 2 retrogenes
retro_nleu_1275, retro_nleu_1479,
Otolemur garnettii ENSOGAG00000026665 ortholog_one2many 1 retrogene
retro_ogar_233,
Sus scrofa ENSSSCG00000009036 ortholog_one2one 2 retrogenes
retro_sscr_474, retro_sscr_475,
Tarsius syrichta ENSTSYG00000012759 ortholog_one2one 4 retrogenes
retro_tsyr_1332, retro_tsyr_1727, retro_tsyr_340, retro_tsyr_653,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_368 95.00 100.00
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Download FASTA sequences of all ENSCPOG00000015389 retrocopies