Parental gene:

ENSCPOG00000012875

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_10:26979683..26985368(+)


>ENSCPOG00000012875
AGAACTTGTATCTTGCACTCCACAATCCTGTTTAGGTTTTCAGCTGCTACTAAAGATAATGAGCATAAGCATTCACTGAC
CAAGACTCCAGCCAGAAAGTCTCCACATGTGACCACATCTGGGAACATGTTAAAAGGCCAAGCTGTGTTAAGGACACCCA
CATTAAAGACCACCAAGAGGAATTCTGCTGCTGGTATCACCCCATTCAATCTGACAGCCAAGGGAATGCAGACTCCTGTC
TCCAGTAAGAAACCAGTATTTGATCTCAAAGCAAGTTTGTCTCGTCCCCTCAACTATGAGCCACACAAAGGAAAGCTGAA
ACCCTGGGGGCAATCTAAAGAAAATAATTCTCTGAATGAACATGTGAGCAGAGTGAGTTACCATAAGAAAACTTACAAGC
AACCTCCTCTCCATACCAGGGAAGAGCAACGAAAGAAACACGAGCAAGAACGAAAGGAGAAGAAAGCCAAGGTTCTGGAA
GCTCGAAGGGGCCTCACTGTGGTTAAAGAT

Library Parental gene expression (RPM)
SRP017611_brain 6 .33 RPM
SRP017611_kidney 4 .08 RPM
SRP017611_liver 1 .83 RPM
SRP040447_lung 4 .64 RPM
SRP040447_skeletal_muscle 1 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010774 ortholog_one2many 1 retrogene
retro_btau_1714,
Canis familiaris ENSCAFG00000009538 ortholog_one2many 3 retrogenes
retro_cfam_1685, retro_cfam_2137, retro_cfam_578,
Myotis lucifugus ENSMLUG00000009782 ortholog_many2many 1 retrogene
retro_mluc_389,
Mustela putorius furo ENSMPUG00000008844 ortholog_many2many 1 retrogene
retro_mputfur_1626,
Otolemur garnettii ENSOGAG00000034763 ortholog_many2many 1 retrogene
retro_ogar_3125,
Tupaia belangeri ENSTBEG00000014283 ortholog_many2many 1 retrogene
retro_tbel_4088,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_993 66.67 64.71
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Download FASTA sequences of all ENSCPOG00000012875 retrocopies