Parental gene:

MOB4, ENSCPOG00000012746

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_104:3154079..3170175(-)


>ENSCPOG00000012746
ATGGTCATGGCGGAGGGGACGGCAGTGCTGAGGCGGAACAGGCCGGGCACCAAGGCGCAGGATTTCTATAATTGGCCTGA
TGAGTCATTTGATGAAATGGACAGTACACTTGCTGTTCAGCAGTATATCCAGCAGAATATAAGGGCAGATTGCTCCAATA
TTGACAGAATCCTTGAACCGCCTGAAGGCCAAGATGAAGGTGTGTGGAAGTATGAACATCTCAGGCAGTTCTGCCTTGAA
CTAAATGGACTTGCCGTCAAACTTCAGAGTGAATGCCATCCAGATACCTGTACTCAGATGACAGCAACAGAACAATGGAT
TTTTCTTTGTGCTGCTCATAAAACTCCAAAAGAGTGCCCTGCCATCGACTACACCAGACACACGCTTGACGGTGCTGCCT
GCCTGCTCAATAGCAATAAGTACTTCCCCAGCAGGGTTAGCATAAAAGAATCATCTGTAGCAAAACTAGGATCTGTATGT
CGTAGGATTTACAGAATATTTTCACATGCTTATTTTCATCACCGGCAGATATTTGATGAATATGAAAATGAAACATTTTT
ATGTCATCGGTTCACTAAATTTGTGATGAAATACAATTTGATGTCCAAGGATAATTTGATTGTTCCGATTTTAGAAGAGG
AAGTTCAGAATTCAGTTTCTGGGGAGAGTGAAGCATGA

Library Parental gene expression (RPM)
SRP017611_brain 21 .57 RPM
SRP017611_kidney 27 .01 RPM
SRP017611_liver 16 .80 RPM
SRP040447_lung 23 .43 RPM
SRP040447_skeletal_muscle 29 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004020 ortholog_one2one 2 retrogenes
retro_cjac_1960, retro_cjac_3238,
Homo sapiens ENSG00000115540 ortholog_one2one 2 retrogenes
retro_hsap_2275, retro_hsap_906,
Gorilla gorilla ENSGGOG00000009005 ortholog_one2one 2 retrogenes
retro_ggor_733, retro_ggor_743,
Latimeria chalumnae ENSLACG00000015430 ortholog_one2one 1 retrogene
retro_lcha_112,
Macaca mulatta ENSMMUG00000016547 ortholog_one2one 1 retrogene
retro_mmul_829,
Monodelphis domestica ENSMODG00000012305 ortholog_one2one 2 retrogenes
retro_mdom_1333, retro_mdom_963,
Oryctolagus cuniculus ENSOCUG00000005712 possible_ortholog 1 retrogene
retro_ocun_30,
Otolemur garnettii ENSOGAG00000000272 ortholog_one2one 1 retrogene
retro_ogar_2739,
Ochotona princeps ENSOPRG00000016650 ortholog_one2one 2 retrogenes
retro_opri_444, retro_opri_812,
Pongo abelii ENSPPYG00000013047 ortholog_one2one 6 retrogenes
retro_pabe_1943, retro_pabe_2021, retro_pabe_3600, retro_pabe_781, retro_pabe_795, retro_pabe_970,
Sarcophilus harrisii ENSSHAG00000017821 ortholog_one2one 1 retrogene
retro_shar_351,
Ictidomys tridecemlineatus ENSSTOG00000021024 ortholog_one2one 1 retrogene
retro_itri_727,
Tarsius syrichta ENSTSYG00000001726 ortholog_one2one 1 retrogene
retro_tsyr_1673,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_318 69.68 67.11
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2. retro_cpor_804 80.13 68.44
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Download FASTA sequences of all ENSCPOG00000012746 retrocopies