Parental gene:

MOB4, ENSCJAG00000004020

Aliases:None
Description:MOB family member 4, phocein [Source:HGNC Symbol;Acc:17261]
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:112831050..112870085(+)


>ENSCJAG00000004020
ATGGTCATGGCGGAGGGGACTGCAGTTCTGAGGCGGAACAGGCCGGGCACCAAGGCGCAGGATTTCTATAATTGGCCTGA
TGAATCCTTTGATGAAATGGACAGTACACTAGCTGTTCAACAGTATATTCAACAGAATATAAGAGCCGATTGCTCCAATA
TTGACAAAATTCTTGAACCACCTGAAGGCCAAGATGAAGGTGTATGGAAGTATGAACATTTAAGGCAATTCTGCCTTGAG
CTAAATGGACTTGCTGTCAAACTTCAGAGCGAATGCCATCCAGATACTTGCACTCAAATGACAGCAACTGAACAATGGAT
TTTTCTTTGTGCAGCTCATAAAACTCCAAAAGAGTGTCCTGCTATTGACTACACTAGACACACACTTGATGGTGCTGCAT
GTCTTCTGAATAGCAATAAATATTTTCCCAGCAGGGTTAGCATAAAGGAATCATCTGTAGCGAAACTAGGATCAGTATGC
CGTAGGATTTACAGAATATTTTCACATGCTTATTTTCATCATCGGCAGATATTTGATGAATATGAAAATGAAACATTTTT
GTGTCATCGGTTTACTAAATTTGTGATGAAATATAATTTGATGTCCAAGGATAACCTGATTGTACCAATTTTAGAAGAGG
AAGTACAGAATTCAGTTTCTGGGGAAAGTGAAGCATGA

Library Parental gene expression (RPM)
SRP051959_colon 19 .26 RPM
SRP051959_heart 20 .35 RPM
SRP051959_kidney 17 .64 RPM
SRP051959_liver 11 .31 RPM
SRP051959_lung 17 .70 RPM
SRP051959_lymph_node 16 .60 RPM
SRP051959_skeletal_muscle 15 .02 RPM
SRP051959_spleen 17 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000012746 ortholog_one2one 2 retrogenes
retro_cpor_318, retro_cpor_804,
Homo sapiens ENSG00000115540 ortholog_one2one 2 retrogenes
retro_hsap_2275, retro_hsap_906,
Gorilla gorilla ENSGGOG00000009005 ortholog_one2one 2 retrogenes
retro_ggor_733, retro_ggor_743,
Latimeria chalumnae ENSLACG00000015430 ortholog_one2one 1 retrogene
retro_lcha_112,
Macaca mulatta ENSMMUG00000016547 ortholog_one2one 1 retrogene
retro_mmul_829,
Monodelphis domestica ENSMODG00000012305 ortholog_one2one 2 retrogenes
retro_mdom_1333, retro_mdom_963,
Oryctolagus cuniculus ENSOCUG00000005712 possible_ortholog 1 retrogene
retro_ocun_30,
Otolemur garnettii ENSOGAG00000000272 ortholog_one2one 1 retrogene
retro_ogar_2739,
Ochotona princeps ENSOPRG00000016650 ortholog_one2one 2 retrogenes
retro_opri_444, retro_opri_812,
Pongo abelii ENSPPYG00000013047 ortholog_one2one 6 retrogenes
retro_pabe_1943, retro_pabe_2021, retro_pabe_3600, retro_pabe_781, retro_pabe_795, retro_pabe_970,
Sarcophilus harrisii ENSSHAG00000017821 ortholog_one2one 1 retrogene
retro_shar_351,
Ictidomys tridecemlineatus ENSSTOG00000021024 ortholog_one2one 1 retrogene
retro_itri_727,
Tarsius syrichta ENSTSYG00000001726 ortholog_one2one 1 retrogene
retro_tsyr_1673,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1960 95.56 100.00
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2. retro_cjac_3238 81.67 52.89
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Download FASTA sequences of all ENSCJAG00000004020 retrocopies