Parental gene: | EIF3J, ENSCPOG00000012396 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_10:29863491..29871644(+) |
>ENSCPOG00000012396
TTAGAAGAACCTGAAGAACCTAAAGTGCTAACACCAGAAGAACAATTAGCAGATAAACTTCGGCTAAAGAAATTACAGGA
AGAATCAGACCTTGAATTAGCAAAAGAAACTTTCGGTGTTAATAACACAGTTTATGGAATAGATGCTATGAATCCATCTT
CAAGAGATGATTTCACAGAGTTTGGAAAGTTACTAAAAGATAAAATTACACAATATGAAAAGTCACTATATTATGCGAGT
TTTTTGGAAGCTTTAGTTCGAGATGTGTGTATTTCATTGGAAATTGATGACTTGAAAAAGATTACCAATTCATTGACTGT
GCTTTGCAGTGAAAAACAGAAGCAAGAAAAGCAAAGCAAAGCCAAAAAGAAGAAAAAAGGTGTGGTTCCTGGAGGGGGAC
TGAAGGCCACGATGAAAGACGATCTGGCAGATTATGGTGGTTACGATGGAGGATATGTACAAGACTATGAAGACTTTATG
TGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 27 .32 RPM |
| SRP017611_kidney | 34 .65 RPM |
| SRP017611_liver | 31 .03 RPM |
| SRP040447_lung | 21 .97 RPM |
| SRP040447_skeletal_muscle | 36 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002412 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000548 | possible_ortholog | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000010372 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017696 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000027236 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005568 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005376 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_500 | 53.15 | 68.75 | Please wait, loading  |
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| 2. | retro_cpor_1357 | 71.96 | 66.25 | Please wait, loading |
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| 3. | retro_cpor_1358 | 71.96 | 66.25 | Please wait, loading |
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Download FASTA sequences of all ENSCPOG00000012396 retrocopies