Parental gene:

MORF4L1, ENSCPOG00000003778

Aliases:None
Description:mortality factor 4 like 1 [Source:HGNC Symbol;Acc:16989]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_190:368350..385915(+)


>ENSCPOG00000003778
AAATGCGCCAAGCAGGACCCGAAGCCCAAGTTTCAGGAGGGCGAACGAGTACTGTGCTTTCATGGGCCTCTTCTTTATGA
AGCAAAGTGTGTAAAGGTTGCCATAAAGGACAAACAAGTAAAATACTTTATACACTACAGTGGTTGGAATAAAAAAAGTG
CTGTGAGGCCCAGGCGCTCTGAAAACACTTTGAAGACACATGAGGATATTGTAGCCCTTTTTCCTGTTCCTGAAGGAGCT
CCCTCAGTACACCACCCCCTCCTGACCTCTAGTTGGGATGAGTGGGTTCCAGAAAGCAGAGTACTCAAGTATGTGGACAC
CAATCTGCAGAAACAGCGAGAACTTCAAAAGGCCAATCAGGAGCAATATGCAGAGGGAAAGATGAGAGGGGCTGCTCCAG
GAAAGAAGACAGCTGGTCTGCAACAGAAGAATGTTGACGTGAAAACTAAAAAGAACAAACAAAAAACCCCTGGTAATGGA
GATGGTGGCAGTACCAGTGAGACACCTCAGCCTCCTCGGAAGAAGAGGGCCCGGGTAGATCCTACTGTTGAAAATGAAGA
AACTTTTATGAACAGAGTTGAAGTTAAAGTAAAGATTCCTGAAGAGCTAAAACCGTGGCTTGTTGATGACTGGGACCTAA
TTACTAGACAGAAACAGCTGTTTTATCTTCCTGCCAAGAAGAATGTGGATTCCATTCTAGAGGACTATGCAAATTACAAG
AAATCTCGTGGAAACACAGATAATAAGGAGTATGCAGTTAATGAGGTTGTAGCAGGGATTAAAGAATACTTCAATGTGAT
GCTGGGCACTCAGCTCCTCTACAAATTTGAGAGACCACAGTATGCAGAGATCCTTGCTGATCACCCTGATGCACCCATGT
CACAGGTGTATGGAGCACCACATCTACTGAGATTATTTGTACGAATTGGAGCGATGTTGGCCTACACACCTCTGGATGAG
AAAAGCCTTGCTTTATTACTGAATTATCTTCATGACTTCCTCAAGTATCTGGCGAAGAATTCGGCAACCTTGTTTAGTGC
CAGTGATTATGAAGTGGCCCCCCCTGAGTACCATCGGAAAGCAGTGTGA

Library Parental gene expression (RPM)
SRP017611_brain 120 .21 RPM
SRP017611_kidney 217 .33 RPM
SRP017611_liver 104 .03 RPM
SRP040447_lung 197 .23 RPM
SRP040447_skeletal_muscle 132 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010988 possible_ortholog 1 retrogene
retro_btau_137,
Canis familiaris ENSCAFG00000014113 possible_ortholog 1 retrogene
retro_cfam_20,
Callithrix jacchus ENSCJAG00000002214 possible_ortholog 5 retrogenes
retro_cjac_2113, retro_cjac_2280, retro_cjac_2574, retro_cjac_3026, retro_cjac_3179,
Equus caballus ENSECAG00000008091 ortholog_one2one 1 retrogene
retro_ecab_62,
Felis catus ENSFCAG00000012197 ortholog_one2one 1 retrogene
retro_fcat_75,
Loxodonta africana ENSLAFG00000009851 ortholog_one2one 1 retrogene
retro_lafr_62,
Myotis lucifugus ENSMLUG00000001756 ortholog_one2one 1 retrogene
retro_mluc_324,
Monodelphis domestica ENSMODG00000011517 possible_ortholog 2 retrogenes
retro_mdom_150, retro_mdom_158,
Oryctolagus cuniculus ENSOCUG00000015117 ortholog_one2one 2 retrogenes
retro_ocun_108, retro_ocun_21,
Otolemur garnettii ENSOGAG00000006047 possible_ortholog 4 retrogenes
retro_ogar_1594, retro_ogar_2616, retro_ogar_2896, retro_ogar_50,
Sorex araneus ENSSARG00000004519 ortholog_one2one 1 retrogene
retro_sara_15,
Sarcophilus harrisii ENSSHAG00000018402 possible_ortholog 1 retrogene
retro_shar_393,
Ictidomys tridecemlineatus ENSSTOG00000013294 possible_ortholog 3 retrogenes
retro_itri_111, retro_itri_1545, retro_itri_1608,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_114 88.37 59.39
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cpor_915 81.12 53.59
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_cpor_1409 94.31 77.35
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCPOG00000003778 retrocopies