Parental gene: | UFM1, ENSCJAG00000017903 |
| Aliases: | None |
| Description: | ubiquitin-fold modifier 1 [Source:HGNC Symbol;Acc:20597] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:151561648..151574749(+) |
>ENSCJAG00000017903
GTGATCCAAGCCTTTTCAACAACTACCCCATGCAGTCTTCATCTCTTCATTTTCTCTACCTTCCTGGCTCGCGCCCTTCC
TGGAGCCTCTCCCACTGGAGCCTGTGAGGAGAGACTCAGCGTTCCTGAAAGTACACCTTTCACAGCAGTCTTAAAGTTTG
CAGCAGAAGAATTTAAAGTTCCTGCTGCAACAAGTGCCATTATTACCAATGATGGAATAGGAATAAATCCTGCACAGACT
GCTGGAAATGTTTTTCTAAAACATGGTTCAGAACTGCGGATTATTCCTAGAGATCGTGTTGGAAGTTGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 5 .88 RPM |
| SRP051959_heart | 3 .19 RPM |
| SRP051959_kidney | 6 .86 RPM |
| SRP051959_liver | 7 .80 RPM |
| SRP051959_lung | 4 .15 RPM |
| SRP051959_lymph_node | 4 .98 RPM |
| SRP051959_skeletal_muscle | 1 .99 RPM |
| SRP051959_spleen | 4 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000006026 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000014564 | ortholog_one2one | 3 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000008471 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000120686 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026214 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000001660 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000008048 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014990 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000027746 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002556 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007023 | ortholog_one2one | 6 retrogenes | |
| Pongo abelii | ENSPPYG00000005293 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000040645 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000038176 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000021299 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000016449 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000011105 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000015482 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1489 | 76.92 | 62.14 | Please wait, loading  |
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| 2. | retro_cjac_2545 | 86.76 | 80.00 | Please wait, loading |
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| 3. | retro_cjac_2807 | 80.60 | 78.82 | Please wait, loading |
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| 4. | retro_cjac_2872 | 80.72 | 97.65 | Please wait, loading |
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Download FASTA sequences of all ENSCJAG00000017903 retrocopies