Parental gene: | MPHOSPH6, ENSCJAG00000016498 |
| Aliases: | None |
| Description: | M-phase phosphoprotein 6 [Source:HGNC Symbol;Acc:7214] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 20:36303964..36330231(-) |
>ENSCJAG00000016498
ATGGCGGCCGAGCGCAAGTCAAAGTTGTCCAAGAATCTGCTACGCATGAAGTTTATGCAAAGGGGACTGGACTCAGAAAC
CAAGAAACAACTGGAAGAGGAAGAAAAGAAAATCATTAGTGAAGAGCACTGGTACTTGGATTTGCCAGAGCTTAAAGAGA
AAGAGAGTTTCATAATAGAAGAGCAGAGTTTCTTATTATGTGAAGACCTTCTCTATGGAAGAATGTCATTCAGAGGATTT
AATCCTGAGGTTGAGAAATTGATGCTTCATATGAATGCTAAGCACAAAGCAGAAGAAGTTGAAGATGAAACAGTGGAGCT
CGATGTGTCAGATGAAGAGATGGCTAGAAGATATGAGACCTTGGTGGGGACAATTGGGAAAAAGTTTGCCAGAAAGAGAG
ACCATGCCAATTATGAAGAAGATGAAAATGGAGACATACAACCGATTAAAGCAAAGAAGATGTTCTTAAAGCCTCAGGAT
TAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 4 .13 RPM |
| SRP051959_heart | 3 .79 RPM |
| SRP051959_kidney | 3 .51 RPM |
| SRP051959_liver | 1 .04 RPM |
| SRP051959_lung | 2 .54 RPM |
| SRP051959_lymph_node | 3 .06 RPM |
| SRP051959_skeletal_muscle | 3 .63 RPM |
| SRP051959_spleen | 2 .73 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000127 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000011060 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000010276 | ortholog_one2one | 6 retrogenes | |
| Homo sapiens | ENSG00000135698 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001405 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000000580 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000268 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022575 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000031843 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000010725 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000024341 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000012532 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000007592 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008398 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000050087 | ortholog_one2many | 6 retrogenes | |
| Tupaia belangeri | ENSTBEG00000013110 | possible_ortholog | 8 retrogenes | |
| Tarsius syrichta | ENSTSYG00000001928 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1730 | 91.30 | 100.00 | Please wait, loading  |
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| 2. | retro_cjac_2976 | 63.64 | 60.00 | Please wait, loading |
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| 3. | retro_cjac_3135 | 77.99 | 98.12 | Please wait, loading |
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| 4. | retro_cjac_3136 | 97.98 | 61.88 | Please wait, loading |
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| 5. | retro_cjac_3283 | 84.40 | 66.88 | Please wait, loading |
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Download FASTA sequences of all ENSCJAG00000016498 retrocopies