Parental gene:

WDR77, ENSCJAG00000013344

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:147398125..147407430(-)


>ENSCJAG00000013344
ATGCGAAAGGAAACCCCGCCTCCCCTTGTGCCCCCGGCGGCCCGGGAGTGGAACCTTCCCCCTAATGCTCCCGCCTGCAT
GGAACGGCAGTTGGAGGCTGCGCGGTACCGGTCCGATGGGGCGCTTCTCCTTGGGGCCTCCAGCCTGAGTGGCCGCTGCT
GGGCCGGCTCACTCTGGCTTTTTAAGGACCCTTGTGCTGCCCCCAACGAAGGCTTCTGCTCCGCCGGAGTCCAAACGGAG
GCTGGAGTGGCTGACCTCACTTGGGTTGGGGAGAGAGGTATTCTAGTGGCGTCCGATTCAGGTGCTGTTGAATTGTGGGA
GCTAGATGAGAATGAGACACTTATTGTCAGCAAGTTCTGCAAGTATGAGCATGATGACATTGTGTCTACGGTCAGTGTCC
TGAGCTCTGGCACACAAGCTGTCAGTGGTAGCAAAGACTTCTGCATCAAGGTTTGGGACCTTGCTCAGCAGGTGGTACTG
AATTCATACCGAGCTCATGCTGCGCAGGTCACCTGTGTCGCTGCTTCTCCCCACAAGGATTCTGTGTTTCTTTCATGCAG
TGAGGACAATAGAATTTTACTTTGGGATACCCGCTGTCCCAAGCCAGCATCACACATTGGTTGCAGTGCCTCTGGCTCCC
TTCCTACCTCACTGGCTTGGCATCCTCAGCAAAGTGAAGTCTTTGTCTTTGGGGACGAAAATGGGATGGTCTCCCTTGTT
GACACCAAGAGTACAAGCTGTGTCCTCAGCTCAGCTGTACATTCCCAGTGTGTCACTGGGCTGGTGTTCTCACCACACAG
TGTTCCTTTCCTGGCCTCTCTCAGTGAAGACTGCTCACTTGCTGTGCTGGACTCAAGCCTTTCTGAGGTGTTTAGAAGCC
GAGCCCACAGAGACTTTGTGAGAGATGCTACTTGGTCCCCGCTCAATCACTCGCTGCTTACCACAGTGGGCTGGGACCAC
CAGGTCGTCCACCACATTGTGCCCACAGAACCTCTCCCAGCCCCTGGACCTGCGAGTGTTGCTGAGTAG

Library Parental gene expression (RPM)
SRP051959_colon 5 .28 RPM
SRP051959_heart 4 .86 RPM
SRP051959_kidney 7 .61 RPM
SRP051959_liver 7 .43 RPM
SRP051959_lung 4 .41 RPM
SRP051959_lymph_node 4 .31 RPM
SRP051959_skeletal_muscle 10 .22 RPM
SRP051959_spleen 3 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014102 ortholog_one2one 1 retrogene
retro_btau_1342,
Choloepus hoffmanni ENSCHOG00000013829 ortholog_one2one 1 retrogene
retro_chof_2618,
Dasypus novemcinctus ENSDNOG00000006521 ortholog_one2one 1 retrogene
retro_dnov_695,
Homo sapiens ENSG00000116455 ortholog_one2one 1 retrogene
retro_hsap_2995,
Gorilla gorilla ENSGGOG00000005208 ortholog_one2one 1 retrogene
retro_ggor_2076,
Macaca mulatta ENSMMUG00000003311 ortholog_one2one 1 retrogene
retro_mmul_1917,
Mus musculus ENSMUSG00000000561 ortholog_one2one 1 retrogene
retro_mmus_1120,
Nomascus leucogenys ENSNLEG00000003918 ortholog_one2one 1 retrogene
retro_nleu_746,
Oryctolagus cuniculus ENSOCUG00000007801 ortholog_one2one 1 retrogene
retro_ocun_535,
Pongo abelii ENSPPYG00000001033 ortholog_one2one 1 retrogene
retro_pabe_2482,
Pan troglodytes ENSPTRG00000001098 ortholog_one2one 1 retrogene
retro_ptro_2026,
Tupaia belangeri ENSTBEG00000010325 ortholog_one2one 1 retrogene
retro_tbel_2253,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1166 84.97 100.00
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2. retro_cjac_3063 94.74 100.00
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Download FASTA sequences of all ENSCJAG00000013344 retrocopies