Parental gene:

IDH3G, ENSCJAG00000011185

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:140321128..140328663(-)


>ENSCJAG00000011185
ATGGCGCTGAAGGTAGCGACGGCCGCCAGCGGCGCTGCGAAGGCAGTGCTCAGGCCAGCCCTTTTCTGCCGTCCCTGGGA
GGTTCTAGGCGCCTATGAGGCCCCCGAGCAGCTCCTCAGTAAGTACCTGCCCGCACCCACGCATGTGTCGTCTCGGTATG
GCGGGCGGCACACGGTGACCATGATCCCAGGCGATGGCATCGGGCCGGAGCTCATGCTGCACGTGAAGTCCGTTTTCAGG
CACGCATGTGTACCGGTGGACTTTGAAGAGGTGCACGTGAGTTCCAATGCCGATGAAGAGGACATTCGCAATGCTATCAT
GGCCATCCGCCGGAACCGTGTGGCCCTGAAGGGCAACATCGAAACCAACCATAACCTGCCGCCATCCCACAAATCCCGAA
ACAACATCCTTCGCACCAGCCTGGACCTCTATGCCAACGTCATCCACTGTAAGAGCCTGCCAGGTGTGGTGACCCGGCAT
AAGGACATAGACATTCTCATCGTCCGGGAGAACACAGAGGGCGAGTACAGCAGCCTGGAGCATGAGAGTGTGGCGGGAGT
GGTGGAGAGCCTGAAGATCATCACCAAGGCCAAGTCCCTGCGCATTGCCGAGTATGCCTTCAAGTTGGCGCAGGAGAGCG
GGCGGAAGAAAGTGACGGCTGTGCACAAGGCCAACATCATGAAACTGGGCGATGGGCTTTTCCTGCAGTGCTGCAGGGAG
GTGGCAGCTGGCTACCCCCAGATCACCTTCGAGAACATGATTGTGGACAACACCACCATGCAGCTGGTGTCCCGGCCCCA
GCAGTTTGATGTCATGGTGATGCCCAATCTCTATGGCAACATTGTCAACAACGTCTGCGCGGGACTGGTCGGAGGCCCAG
GCCTTGTGGCTGGGGCCAACTATGGCCATGTGTACGCGGTGTTCGAAACGGCTACGAGGAACACTGGCAAGAGTATCGCC
AACAAGAACATCGCCAACCCCACGGCCACCCTGCTGGCCAGCTGCATGATGCTGGACCACCTCAAGCTGCACTCCTACGC
CACCTCCATCCGAAAGGCTGTCCTGGCGTCCATGGACAATGAGAATATGCACACTCCAGACATTGGGGGCCAGGGCACAA
CATCTGAGGCCATCCAGGACATCATCCGCCACATCCGTGTTGTCAATGGCCGGGCTGTGGAGGCCTAG

Library Parental gene expression (RPM)
SRP051959_colon 16 .22 RPM
SRP051959_heart 30 .52 RPM
SRP051959_kidney 35 .30 RPM
SRP051959_liver 10 .98 RPM
SRP051959_lung 15 .31 RPM
SRP051959_lymph_node 15 .43 RPM
SRP051959_skeletal_muscle 33 .67 RPM
SRP051959_spleen 17 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018466 ortholog_one2one 1 retrogene
retro_amel_1892,
Bos taurus ENSBTAG00000001059 ortholog_one2one 1 retrogene
retro_btau_1194,
Canis familiaris ENSCAFG00000019286 ortholog_one2one 1 retrogene
retro_cfam_1023,
Equus caballus ENSECAG00000018509 ortholog_one2one 1 retrogene
retro_ecab_941,
Homo sapiens ENSG00000067829 ortholog_one2one 1 retrogene
retro_hsap_759,
Latimeria chalumnae ENSLACG00000007365 ortholog_one2one 1 retrogene
retro_lcha_17,
Loxodonta africana ENSLAFG00000006904 ortholog_one2one 1 retrogene
retro_lafr_560,
Macropus eugenii ENSMEUG00000013934 ortholog_one2one 1 retrogene
retro_meug_203,
Myotis lucifugus ENSMLUG00000004457 ortholog_one2many 1 retrogene
retro_mluc_396,
Mustela putorius furo ENSMPUG00000008781 ortholog_one2one 1 retrogene
retro_mputfur_644,
Mus musculus ENSMUSG00000002010 ortholog_one2one 1 retrogene
retro_mmus_134,
Nomascus leucogenys ENSNLEG00000013540 ortholog_one2one 1 retrogene
retro_nleu_394,
Otolemur garnettii ENSOGAG00000006735 ortholog_one2one 1 retrogene
retro_ogar_25,
Pteropus vampyrus ENSPVAG00000013163 ortholog_one2one 1 retrogene
retro_pvam_373,
Rattus norvegicus ENSRNOG00000037284 ortholog_one2one 1 retrogene
retro_rnor_209,
Sus scrofa ENSSSCG00000012783 ortholog_one2one 1 retrogene
retro_sscr_662,
Tursiops truncatus ENSTTRG00000011728 ortholog_one2one 1 retrogene
retro_ttru_848,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1597 86.11 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000011185 retrocopies