Parental gene:

ENSCAFG00000029477

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:28:1767371..1795954(+)


>ENSCAFG00000029477
ATGGAGAGCGGCGGGGGAAGCGGGAACAAAACCACCGGGGGCTTGGCCGGCTTTTTCGGCGCCGGCGGGGCAAGTTACTC
GCACGCGGATTTGGCCGGAGTCCCGCTGACTGGTATGAACCCTCTGTCTCCTTATTTAAATGTGGATCCACGATACCTGG
TGCAGGATACTGATGAGTTTATTTTACCCACTGGAGCTAATAAAACCCGGGGCAGATTTGAACTGGCCTTCTTTACCATT
GGAGGATGTTGTATGACAGGGGCTGCATTTGGAGCAATGAACGGTCTACGGCTAGGATTGAAGGAAACCCAGAACATGTC
CTGGTCCAAACCAAGAAATGTACAGATTTTGAACATGGTGACTAGGCAAGGGGCACTTTGGGCTAATACTCTAGGTTCTC
TAGCTTTGCTCTATAGTGCATTTGGTGTCATCATTGAGAAAACACGAGGTGCAGAAGATGACCTTAACACAGTAGCAGCT
GGAACCATGACAGGCATGTTGTATAAATGTACAGGTAGGTACTACTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 26 .50 RPM
SRP017611_brain 20 .72 RPM
SRP017611_kidney 32 .03 RPM
SRP017611_liver 15 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007501 ortholog_one2one 1 retrogene
retro_amel_1488,
Choloepus hoffmanni ENSCHOG00000007073 ortholog_one2one 1 retrogene
retro_chof_797,
Callithrix jacchus ENSCJAG00000013336 ortholog_one2one 1 retrogene
retro_cjac_2965,
Cavia porcellus ENSCPOG00000019917 ortholog_one2one 2 retrogenes
retro_cpor_1013, retro_cpor_321,
Monodelphis domestica ENSMODG00000002661 ortholog_one2one 2 retrogenes
retro_mdom_1202, retro_mdom_860,
Mus musculus ENSMUSG00000013701 ortholog_one2many 1 retrogene
retro_mmus_2,
Oryctolagus cuniculus ENSOCUG00000000525 ortholog_one2many 1 retrogene
retro_ocun_73,
Otolemur garnettii ENSOGAG00000015393 ortholog_one2one 1 retrogene
retro_ogar_2627,
Ochotona princeps ENSOPRG00000005255 ortholog_one2one 2 retrogenes
retro_opri_520, retro_opri_920,
Procavia capensis ENSPCAG00000015914 ortholog_one2one 1 retrogene
retro_pcap_181,
Rattus norvegicus ENSRNOG00000019811 ortholog_one2many 3 retrogenes
retro_rnor_1804, retro_rnor_225, retro_rnor_661,
Sorex araneus ENSSARG00000010335 ortholog_one2one 1 retrogene
retro_sara_86,
Sus scrofa ENSSSCG00000025276 ortholog_one2one 1 retrogene
retro_sscr_404,
Ictidomys tridecemlineatus ENSSTOG00000007041 ortholog_one2one 1 retrogene
retro_itri_1043,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_329 92.44 98.29
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Download FASTA sequences of all ENSCAFG00000029477 retrocopies