Parental gene:

UQCRB, ENSCAFG00000009449

Aliases:None
Description:ubiquinol-cytochrome c reductase binding protein [Source:HGNC Symbol;Acc:12582]
Organism:Dog (Canis familiaris)
Coordinates:29:40742548..40744543(-)


>ENSCAFG00000009449
TCAGTTGCAGCATCAAGCCGGTGGCTGGAGGGCATTCGGAAGTGGTATTACAATGCTGCAGGGTTCAATAAACTGGGGTT
AATGCGAGACGATACAATATACGAAAATGAGGATGTGAAGGAGGCCATAAGAAGGCTTCCTGAGAACCTTTACAATGACA
GGATGTTCCGCATTAAGAGGGCGCTGGACCTGACCATGAGGCATCAGATCTTGCCTAAGGAGCAGTGGACGAAATACGAG
GAGGATAAATTCTACCTTGAACCTTATCTGAAAGAAGTTATTCGAGAAAGAAAAGAGAGAGAAGAATGGGCAAAGAAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 47 .46 RPM
SRP017611_brain 28 .18 RPM
SRP017611_kidney 105 .59 RPM
SRP017611_liver 28 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007287 ortholog_one2one 1 retrogene
retro_amel_985,
Callithrix jacchus ENSCJAG00000020560 ortholog_one2one 2 retrogenes
retro_cjac_2206, retro_cjac_894,
Cavia porcellus ENSCPOG00000012149 ortholog_one2one 2 retrogenes
retro_cpor_1086, retro_cpor_866,
Dasypus novemcinctus ENSDNOG00000017312 possible_ortholog 8 retrogenes
retro_dnov_1109, retro_dnov_1163, retro_dnov_1706, retro_dnov_2410, retro_dnov_2518, retro_dnov_369, retro_dnov_608, retro_dnov_798,
Erinaceus europaeus ENSEEUG00000001312 ortholog_one2one 1 retrogene
retro_eeur_224,
Felis catus ENSFCAG00000026302 ortholog_one2one 5 retrogenes
retro_fcat_1292, retro_fcat_178, retro_fcat_1780, retro_fcat_378, retro_fcat_558,
Homo sapiens ENSG00000156467 ortholog_one2one 2 retrogenes
retro_hsap_3261, retro_hsap_4838,
Gorilla gorilla ENSGGOG00000026528 ortholog_one2one 1 retrogene
retro_ggor_3017,
Latimeria chalumnae ENSLACG00000004465 ortholog_one2many 1 retrogene
retro_lcha_127,
Loxodonta africana ENSLAFG00000002542 ortholog_one2one 1 retrogene
retro_lafr_727,
Myotis lucifugus ENSMLUG00000007182 ortholog_one2one 1 retrogene
retro_mluc_1601,
Macaca mulatta ENSMMUG00000008804 ortholog_one2one 3 retrogenes
retro_mmul_2053, retro_mmul_2065, retro_mmul_2581,
Mus musculus ENSMUSG00000021520 ortholog_one2one 4 retrogenes
retro_mmus_1175, retro_mmus_1628, retro_mmus_2610, retro_mmus_514,
Nomascus leucogenys ENSNLEG00000026670 ortholog_one2many 1 retrogene
retro_nleu_1357,
Oryctolagus cuniculus ENSOCUG00000008113 ortholog_one2one 3 retrogenes
retro_ocun_1149, retro_ocun_345, retro_ocun_570,
Otolemur garnettii ENSOGAG00000004302 ortholog_one2one 1 retrogene
retro_ogar_1451,
Ochotona princeps ENSOPRG00000008892 ortholog_one2one 2 retrogenes
retro_opri_109, retro_opri_688,
Pongo abelii ENSPPYG00000018763 ortholog_one2one 2 retrogenes
retro_pabe_2703, retro_pabe_3762,
Rattus norvegicus ENSRNOG00000024967 ortholog_one2many 1 retrogene
retro_rnor_290,
Sorex araneus ENSSARG00000002999 ortholog_one2one 3 retrogenes
retro_sara_460, retro_sara_52, retro_sara_704,
Ictidomys tridecemlineatus ENSSTOG00000008017 ortholog_one2many 1 retrogene
retro_itri_46,
Tarsius syrichta ENSTSYG00000010502 ortholog_one2one 2 retrogenes
retro_tsyr_1114, retro_tsyr_898,
Drosophila melanogaster FBgn0030733 ortholog_many2many 1 retrogene
retro_dmel_22,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_792 90.10 94.34
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2. retro_cfam_1504 63.73 93.40
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3. retro_cfam_1509 75.79 88.68
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4. retro_cfam_1531 67.92 99.06
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Download FASTA sequences of all ENSCAFG00000009449 retrocopies