Parental gene:

TAF10, ENSCAFG00000006498

Aliases:None
Description:TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa [Source:HGNC Symbol;Acc:11543]
Organism:Dog (Canis familiaris)
Coordinates:21:29918021..29919321(-)


>ENSCAFG00000006498
ATGAGCTGCAGCGGCTCCGGCGCGGACCCCGAGGCGGCGCCGGGTTCCGCCGCCTCGGCCCCGGGCCCGGCGCCCACGGT
CTCGGCCCCCGCAGCGCTGCCCGCCGGCACCGCTGCGGAGAACAAGGCCAGCCCCGCGGGGACAGCGGGGGGACCCGGGG
CTGGAGCTGCGGCAGGGGGCACGGGACCCGTGGCGGCGCGGGCCGGGGAGCCGGCCGAGCGGCGCGGGGCGGCTCCCGTG
TCGGCGGGCGGCGCGGCGCCCCCGGAGGGGGCCATGTCTAACGGGGTTTACGTGCTGCCGAGCGCCGCCAACGGAGACGT
GAAGCCGGTGGTGTCCAGCACGCCTCTGGTGGACTTCCTGATGCAGCTGGAGGACTATACGCCTACGATCCCAGATGCAG
TGACTGGTTACTACCTGAACCGTGCTGGCTTTGAGGCCTCGGACCCACGCATAATTCGGCTCATCTCCCTAGCTGCCCAG
AAATTCATCTCAGATATTGCCAACGATGCCCTACAGCACTGCAAAATGAAGGGCACAGCTTCTGGCAGCTCCCGAAGCAA
GAGCAAGGACCGCAAGTACACTCTAACCATGGAGGACTTGACCCCTGCCCTCAGCGAATATGGCATCAATGTGAAGAAGC
CGCACTACTTCACCTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 0 .00 RPM
SRP017611_brain 0 .00 RPM
SRP017611_kidney 0 .00 RPM
SRP017611_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000000814 ortholog_one2one 1 retrogene
retro_dnov_592,
Equus caballus ENSECAG00000007794 ortholog_one2one 1 retrogene
retro_ecab_525,
Erinaceus europaeus ENSEEUG00000008412 ortholog_one2one 3 retrogenes
retro_eeur_542, retro_eeur_692, retro_eeur_709,
Echinops telfairi ENSETEG00000008886 ortholog_one2one 1 retrogene
retro_etel_2090,
Felis catus ENSFCAG00000015390 ortholog_one2one 1 retrogene
retro_fcat_1458,
Macropus eugenii ENSMEUG00000008216 ortholog_one2one 2 retrogenes
retro_meug_1645, retro_meug_992,
Myotis lucifugus ENSMLUG00000024459 possible_ortholog 1 retrogene
retro_mluc_1960,
Macaca mulatta ENSMMUG00000007743 ortholog_one2one 1 retrogene
retro_mmul_1144,
Mus musculus ENSMUSG00000043866 ortholog_one2many 1 retrogene
retro_mmus_35,
Tursiops truncatus ENSTTRG00000004894 ortholog_one2one 1 retrogene
retro_ttru_1113,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_992 86.61 57.80
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2. retro_cfam_1041 66.37 50.92
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Download FASTA sequences of all ENSCAFG00000006498 retrocopies