Parental gene:

PDHB, ENSBTAG00000021724

Aliases:None
Description:Pyruvate dehydrogenase E1 component subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P11966]
Organism:Cow (Bos taurus)
Coordinates:22:43461213..43466626(+)


>ENSBTAG00000021724
ATGGCGGTGGTTGCTGTGTTGGTGCGGAAACCCCTTGAGCAGGTCTCCGGGCTGCTGAGGAGGCGGTTCCACCGGACCGC
GCCGGCTGCACTGCAGGTGACAGTTCGTGAGGCTATAAATCAAGGCATGGATGAGGAGCTGGAAAGAGATGAGAAGGTAT
TTCTCCTTGGGGAAGAAGTTGCCCAGTACGATGGGGCATATAAGGTTAGTCGAGGCCTGTGGAAGAAATATGGAGATAAG
AGGATCATAGATACTCCCATATCTGAGATGGGCTTTGCTGGAATTGCTGTAGGTGCCGCTATGGCTGGGTTACGGCCCAT
TTGTGAATTCATGACCTTCAATTTCTCTATGCAAGCCATCGACCAGGTCATAAACTCAGCTGCCAAGACGTACTACATGT
CAGGGGGCCTTCAGTCTGTGCCCATAGTCTTCAGGGGGCCCAATGGCGCCTCAGCAGGTGTAGCTGCCCAGCACTCACAG
TGTTTTGCTGCCTGGTATGGGCATTGCCCAGGCTTAAAGGTGGTCAGCCCCTGGAGTTCAGAGGATGCAAAAGGGCTTAT
TAAATCAGCCATTCGGGATAACAACCCAGTGGTGGTGCTGGAGAATGAATTGATGTACGGAGTACCTTTTGAACTTCCTT
CAGAAGCTCAGTCAAAAGATTTTCTGATCCCTATTGGAAAAGCCAAAATAGAAAGGCAAGGAACACACGTAACTATAGTT
GCTCATTCAAGACCTGTGGGCCACTGCTTAGAAGCTGCAACAGTACTGTCTAAAGAGGGAATTGAATGTGAGGTGATAAA
TTTGCGAACCATCAGGCCAATGGACATTGAAACAATAGAAGGCAGTGTCATGAAGACCAATCACCTTGTAACCGTGGAAG
GAGGCTGGCCACAGTTCGGAGTAGGAGCTGAAATCTGTGCCAGGATCATGGAAGGCCCCGCGTTCAATTTCCTGGATGCT
CCTGCAGTTCGCGTCACTGGTGCCGATGTGCCTATGCCTTATGCAAAGATTCTAGAAGACAACTCTGTACCTCAGGTTAA
GGACATCATATTTGCAATAAAGAAAACACTGAATATCTAG

Library Parental gene expression (RPM)
ERP005899_liver 61 .57 RPM
ERP005899_muscle 40 .54 RPM
SRP017611_brain 41 .02 RPM
SRP017611_kidney 95 .43 RPM
SRP017611_liver 32 .24 RPM
SRP030211_testis 84 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000007340 ortholog_one2many 2 retrogenes
retro_cfam_1215, retro_cfam_2031,
Callithrix jacchus ENSCJAG00000019739 ortholog_one2one 1 retrogene
retro_cjac_3875,
Dasypus novemcinctus ENSDNOG00000006937 ortholog_one2one 1 retrogene
retro_dnov_1090,
Monodelphis domestica ENSMODG00000002398 ortholog_one2one 1 retrogene
retro_mdom_614,
Mus musculus ENSMUSG00000021748 ortholog_one2one 1 retrogene
retro_mmus_290,
Oryctolagus cuniculus ENSOCUG00000015632 ortholog_one2many 1 retrogene
retro_ocun_342,
Procavia capensis ENSPCAG00000016595 ortholog_one2one 1 retrogene
retro_pcap_261,
Sarcophilus harrisii ENSSHAG00000008480 ortholog_one2many 1 retrogene
retro_shar_5,
Ictidomys tridecemlineatus ENSSTOG00000019553 ortholog_one2one 2 retrogenes
retro_itri_1349, retro_itri_249,
Tupaia belangeri ENSTBEG00000016148 ortholog_one2one 2 retrogenes
retro_tbel_1651, retro_tbel_3170,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_596 70.40 94.99
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Download FASTA sequences of all ENSBTAG00000021724 retrocopies