Parental gene:

TSEN15, ENSBTAG00000016369

Aliases:TSEN15, C16H1ORF19
Description:tRNA-splicing endonuclease subunit Sen15 [Source:RefSeq peptide;Acc:NP_001069780]
Organism:Cow (Bos taurus)
Coordinates:16:66581061..66610924(+)


>ENSBTAG00000016369
ATGGAGGAGCGCGGCGAGTCCCAGCCGACCGCGGGCTGCGGCGATGTGCTCCCGGGCGACGATCGCGGCGGCGGCAGCGC
CCACCCGTGGGCCCCCGAGGACGCCTGGATGGGCACGCACCCTAAGTATTTAGAAATGATGGAATTAGATATAGGAGATG
CCACCCAAGTTTATATAGCGTTCTTGGTTTACCTGGACCTCATGGAGAGTAAAAGCTGGCATGAAGTAAACTGTGTGGGA
CTACCAGATCTCCAGCTCATCTGCCTTCTTGGTACTGAGATAGAAGGAGAAGGGTTACAGACTGTGGTACCTACACCCAT
CAGTGCTTCCCTCAGCCATAACAGGATAAGGGAAATCTTGAAGGCGTCACGAAAATTGCAAGGTGATCCCGACTTGCCCA
CGTCATTTACTTTGGCCATAGTGGAGTCCGACTCTACCATAGTCTACTACAAACTCACTGATGGATTTATGCTGCCGGAT
CCTCAGAATATTTCCCTTAGAAGATGA

Library Parental gene expression (RPM)
ERP005899_liver 33 .74 RPM
ERP005899_muscle 7 .76 RPM
SRP017611_brain 23 .11 RPM
SRP017611_kidney 16 .54 RPM
SRP017611_liver 8 .83 RPM
SRP030211_testis 14 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005356 ortholog_one2one 1 retrogene
retro_cjac_3055,
Dasypus novemcinctus ENSDNOG00000017611 ortholog_one2one 2 retrogenes
retro_dnov_1176, retro_dnov_2529,
Homo sapiens ENSG00000198860 ortholog_one2one 1 retrogene
retro_hsap_1721,
Gorilla gorilla ENSGGOG00000015804 ortholog_one2one 2 retrogenes
retro_ggor_2267, retro_ggor_240,
Loxodonta africana ENSLAFG00000014109 ortholog_one2one 1 retrogene
retro_lafr_684,
Macaca mulatta ENSMMUG00000016409 ortholog_one2one 1 retrogene
retro_mmul_1214,
Mustela putorius furo ENSMPUG00000011790 ortholog_one2one 1 retrogene
retro_mputfur_1261,
Mus musculus ENSMUSG00000014980 ortholog_one2one 1 retrogene
retro_mmus_2721,
Nomascus leucogenys ENSNLEG00000018024 ortholog_one2many 1 retrogene
retro_nleu_98,
Otolemur garnettii ENSOGAG00000003128 ortholog_one2one 1 retrogene
retro_ogar_3264,
Pongo abelii ENSPPYG00000000421 ortholog_one2one 4 retrogenes
retro_pabe_1436, retro_pabe_3065, retro_pabe_3196, retro_pabe_469,
Pan troglodytes ENSPTRG00000023202 ortholog_one2one 2 retrogenes
retro_ptro_1229, retro_ptro_147,
Pteropus vampyrus ENSPVAG00000001103 ortholog_one2one 1 retrogene
retro_pvam_1458,
Ictidomys tridecemlineatus ENSSTOG00000013230 ortholog_one2one 2 retrogenes
retro_itri_1538, retro_itri_1849,
Vicugna pacos ENSVPAG00000002941 ortholog_one2one 2 retrogenes
retro_vpac_381, retro_vpac_565,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_971 82.35 89.29
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Download FASTA sequences of all ENSBTAG00000016369 retrocopies