Parental gene:

NUDCD2, ENSBTAG00000014772

Aliases:None
Description:nudC domain-containing protein 2 [Source:RefSeq peptide;Acc:NP_001035643]
Organism:Cow (Bos taurus)
Coordinates:7:77264727..77270660(-)


>ENSBTAG00000014772
ATGTCAGCCCCGTTTGAGGAGCGCAGTGGGGTGGTTCCGTGCGGAACGCCGTGGGGCCAGTGGTACCAGACCTTGGAGGA
GGTGTTCATTGAAGTTCAGGTGCCGCCAGGCACTCGCGCCCAGGATATCCAGTGCGGCCTGCAGAGCCGGCATGTAGCGC
TGGCCGTGGGTGGCCGCGAGATCCTCAAGGGCAAACTCTTTGACTCTACAATAGCTGATGAGGGAACATGGACTCTGGAG
GATAGAAAAATGGTCCGTATTGTTCTTACAAAGACGAAGAGAGATGCAGCAAATTGTTGGACTTCTCTTCTAGAATCTGA
TTATGCAGCTGACCCTTGGGTGCAAGACCAAATGCAGAGAAAACTTACATTAGAGAGATTTCAGAAAGAAAATCCTGGTT
TTGACTTCAGTGGAGCAGAAATCTCAGGAAACTACACTAAAGGTGGACCAGATTTCTCGAATCTTGAGAAATAA

Library Parental gene expression (RPM)
ERP005899_liver 32 .66 RPM
ERP005899_muscle 17 .05 RPM
SRP017611_brain 8 .86 RPM
SRP017611_kidney 17 .78 RPM
SRP017611_liver 14 .88 RPM
SRP030211_testis 18 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005270 ortholog_one2one 1 retrogene
retro_amel_535,
Callithrix jacchus ENSCJAG00000015367 ortholog_one2one 1 retrogene
retro_cjac_2093,
Cavia porcellus ENSCPOG00000000877 ortholog_one2one 1 retrogene
retro_cpor_936,
Dipodomys ordii ENSDORG00000014291 ortholog_one2one 1 retrogene
retro_dord_188,
Macropus eugenii ENSMEUG00000004802 ortholog_one2one 1 retrogene
retro_meug_1673,
Myotis lucifugus ENSMLUG00000001670 ortholog_one2one 1 retrogene
retro_mluc_1154,
Monodelphis domestica ENSMODG00000007641 ortholog_one2one 2 retrogenes
retro_mdom_1058, retro_mdom_2016,
Ornithorhynchus anatinus ENSOANG00000021414 ortholog_one2one 1 retrogene
retro_oana_122,
Oryctolagus cuniculus ENSOCUG00000005783 ortholog_one2one 1 retrogene
retro_ocun_819,
Otolemur garnettii ENSOGAG00000024929 ortholog_one2one 3 retrogenes
retro_ogar_1486, retro_ogar_1696, retro_ogar_482,
Sarcophilus harrisii ENSSHAG00000007551 ortholog_one2one 1 retrogene
retro_shar_559,
Ictidomys tridecemlineatus ENSSTOG00000028665 ortholog_one2one 1 retrogene
retro_itri_1770,
Tupaia belangeri ENSTBEG00000000307 ortholog_one2one 1 retrogene
retro_tbel_507,
Tarsius syrichta ENSTSYG00000008090 ortholog_one2one 1 retrogene
retro_tsyr_1638,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1735 78.85 66.24
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Download FASTA sequences of all ENSBTAG00000014772 retrocopies