Parental gene: | TSG101, ENSBTAG00000013563 |
| Aliases: | None |
| Description: | tumor susceptibility gene 101 protein [Source:RefSeq peptide;Acc:NP_001091464] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 29:26450456..26492046(+) |
>ENSBTAG00000013563
ATGGCGGGGTCGGAGAGCCAGCTCAAGAAAATGGTGTCCAAGTACAAATACAGAGACCTAACTGTACGTGAAACTGTTAA
CGTTATTAGTTTATACAAAGATCTCAAACCTGTATTGGATTCATATGTTTTTAATGATGGCAGTTCCAGGGAACTAATGA
ACCTTACTGGAACAATTCCTGTGCCTTATAGAGGTAATACATACAATATTCCAATCTGCCTGTGGCTGCTGGACACATAT
CCGTATAATCCCCCTATCTGTTTCGTTAAGCCTACTAGCTCAATGACTATTAAAACAGGAAAGCATGTGGATGCTAATGG
GAAGATATATCTTCCTTATCTACATGAATGGAAGCACCCACAGTCAGACTTGTTGGGGCTTATTCAAGTCATGATTGTGG
TGTTTGGAGATGAACCTCCGGTCTTCTCTCGTCCTACTGTTTCAGCATCCTATCCACCATACCAGGCAACAGGGCCACCA
AATACTTCCTACATGCCAGGCATGCCAAGTGGGATTTCTGCATACCCATCCGGGTACCCTCCCAATCCCAGTGGTTACAC
AGGCTGTCCTTACCCACCTGGTGGTCAGTATCCTGCCACAACAAGTTCCCAGTACCCTTCCCAGCCTCCTGTGACCACTG
TTGGTCCCAGTAGAGATGGCACAATCAGTGAGGACACTATCCGAGCCTCTCTCATCTCAGCGGTCAGCGACAAACTGAGA
TGGCGGATGAAGGAGGAGATGGATCGTGCCCAGGCAGAACTCAACGCCTTGAAACGAACAGAGGAAGACCTGAAAAAAGG
TCACCAGAAACTCGAGGAGATGGTTAACCGTTTAGATCAAGAAGTAGCTGAGGTTGATAAAAACATAGAACTTTTGAGAA
AGAAGGATGAAGAACTCAGTTCTGCTCTGGAGAAAATGGAAAATCAGTCTGAAAACAATGATATTGATGAAGTTATCATT
CCCACAGCCCCACTATACAAACAGATCCTAAATCTGTATGCAGAGGAAAATGCTATTGAAGACACTATTTTTTACCTGGG
AGAAGCCTTGAGGCGGGGAGTCATAGACTTAGATGTCTTCCTAAAGCATGTACGTCTTCTGTCCCGTAAACAGTTCCAGC
TGAGGGCACTAATGCAGAAAGCAAGAAAGACTGCCGGTCTCAGTGACCTCTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 3 .32 RPM |
| ERP005899_muscle | 21 .33 RPM |
| SRP017611_brain | 6 .94 RPM |
| SRP017611_kidney | 11 .02 RPM |
| SRP017611_liver | 4 .38 RPM |
| SRP030211_testis | 54 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000009279 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000011994 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016353 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000014402 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_698 | 91.33 | 100.00 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
| 2. | retro_btau_825 | 90.43 | 71.87 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 3. | retro_btau_979 | 99.23 | 100.00 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 4. | retro_btau_1009 | 96.28 | 95.91 | Please wait, loading |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSBTAG00000013563 retrocopies