Parental gene:

EIF4E2, ENSBTAG00000010598

Aliases:None
Description:eukaryotic translation initiation factor 4E type 2 isoform 1 [Source:RefSeq peptide;Acc:NP_001069263]
Organism:Cow (Bos taurus)
Coordinates:2:120995643..121025344(+)


>ENSBTAG00000010598
ATGAACAACAAGTTCGACGCATTGAAAGATGATGACAGTGGGGACCATGATCAGAATGAAGAAAACAGCACACAGAAAGA
TGGTGAGAAGGAAAAAACGGAACGAGACAAGAGTCAGAGCAGCAGTAAGAGGAAGGCTGTCGTCCCTGGGCCGGCCGAGC
ACCCACTGCAGTATAACTACACTTTTTGGTACTCCAGGAGAACCCCCGGCCGTCCCACCAGCTCACAGAGCTATGAACAG
AATATCAAACAGATTGGCACCTTTGCCTCTGTGGAGCAGTTCTGGAGGTTTTACAGCCACATGGTGCGTCCCGGGGACTT
GACAGGCCACAGCGACTTCCATCTCTTCAAAGAAGGAATTAAACCCATGTGGGAGGATGATGCAAATAAAAATGGCGGAA
AGTGGATAATTCGACTGCGGAAGGGCTTGGCATCCCGCTGCTGGGAGAATCTCATCTTGGCTATGCTGGGGGAACAGTTC
ATGGTTGGGGAGGAGATCTGCGGGGCTGTGGTCTCTGTCCGCTTTCAGGAGGACATTATTTCCATATGGAATAAGACTGC
CAGCGATCAAGCCACCACGGCCCGCATACGGGATACGCTTCGGCGAGTGCTTAACCTACCTCCCAACACCATTATGGAAT
ACAAAACCCACACCGACAGCATCAAGGCCTGGGAGGAGTTTCATGGCCTGGTGAACAGCAGCGGCCGCTGA

Library Parental gene expression (RPM)
ERP005899_liver 2 .23 RPM
ERP005899_muscle 10 .08 RPM
SRP017611_brain 6 .53 RPM
SRP017611_kidney 9 .25 RPM
SRP017611_liver 2 .64 RPM
SRP030211_testis 17 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016456 possible_ortholog 1 retrogene
retro_amel_1304,
Bos taurus ENSBTAG00000003103 within_species_paralog 1 retrogene
retro_btau_1679,
Bos taurus ENSBTAG00000009522 within_species_paralog 3 retrogenes
retro_btau_1094, retro_btau_1702, retro_btau_944,
Canis familiaris ENSCAFG00000011328 ortholog_one2one 1 retrogene
retro_cfam_183,
Callithrix jacchus ENSCJAG00000013786 possible_ortholog 2 retrogenes
retro_cjac_1061, retro_cjac_2717,
Microcebus murinus ENSMICG00000015082 possible_ortholog 2 retrogenes
retro_mmur_806, retro_mmur_975,
Myotis lucifugus ENSMLUG00000011269 possible_ortholog 1 retrogene
retro_mluc_60,
Mustela putorius furo ENSMPUG00000005206 possible_ortholog 2 retrogenes
retro_mputfur_110, retro_mputfur_1554,
Otolemur garnettii ENSOGAG00000009155 possible_ortholog 1 retrogene
retro_ogar_104,
Sarcophilus harrisii ENSSHAG00000013108 possible_ortholog 1 retrogene
retro_shar_101,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1232 61.38 60.17
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2. retro_btau_1498 100.00 94.07
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Download FASTA sequences of all ENSBTAG00000010598 retrocopies