Parental gene:

ENSAMEG00000001020

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192819.1:862558..864810(+)


>ENSAMEG00000001020
GTGCCGCCCTACACCATTGTCTACTTTCCTGTTCGAGGGCGCTGCGAAGCCATGCGCATGCTGCTGGCTGACCAGGGCCA
GAGCTGGAAGGAGGAGGTGGTTACCAAGGAGACCTGGCTGCAGGGCCCGCTCAAGGCCTCCTGTCTCTACGGGCAGCTCC
CCAAGTTCCAGGATGGAGACCTCACCCTGTACCAGTCCAATGCCATCCTGCGGCACCTGGGCCGCTCCCTTGGGCTGTAC
GGGAAGGACCAGCGGGAGGCGGCCCTGCTGGATGTGGTGAACGATGGTGTGGAGGACCTCCGCTGCAAATACGTCATGCT
CATCTACACCAACTACGAGGCAGGGAAAGAGGAGTACTTGAAGGCGCTACCGGGGTACCTGAAGCCCTTTGAGACGCTGC
TGTCGCAGAACGAGGGCGGCCAGGCCTTCATCGTGGGCAACCAGATCTCCTTCGCGGACTACAACTTGCTGGACCTGCTG
CTGATTCACCAGGTCCTGGCCCCCAGCTGCCTGGACTCCTTGCCCCTGCTCTCGGCCTATGTGGCGCGCCTCAGCGCCCG
GCCCAAGCTCAAGGCCTTCCTGGCCTCCCCTGAGCACGTGAACCGCCCCATCAACGGCAACGGGAAGCAGTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004970 within_species_paralog 1 retrogene
retro_amel_1548,
Canis familiaris ENSCAFG00000011349 ortholog_one2many 4 retrogenes
retro_cfam_143, retro_cfam_2043, retro_cfam_46, retro_cfam_617,
Callithrix jacchus ENSCJAG00000000879 possible_ortholog 1 retrogene
retro_cjac_3321,
Macropus eugenii ENSMEUG00000001519 ortholog_many2many 2 retrogenes
retro_meug_1519, retro_meug_1762,
Myotis lucifugus ENSMLUG00000011529 possible_ortholog 4 retrogenes
retro_mluc_1669, retro_mluc_1714, retro_mluc_1962, retro_mluc_629,
Mustela putorius furo ENSMPUG00000004029 ortholog_one2one 2 retrogenes
retro_mputfur_1215, retro_mputfur_1463,
Mus musculus ENSMUSG00000038155 possible_ortholog 1 retrogene
retro_mmus_521,
Oryctolagus cuniculus ENSOCUG00000002230 possible_ortholog 1 retrogene
retro_ocun_391,
Pteropus vampyrus ENSPVAG00000008586 ortholog_one2many 6 retrogenes
retro_pvam_1119, retro_pvam_1463, retro_pvam_568, retro_pvam_664, retro_pvam_681, retro_pvam_718,
Rattus norvegicus ENSRNOG00000018237 possible_ortholog 4 retrogenes
retro_rnor_2140, retro_rnor_2567, retro_rnor_2842, retro_rnor_769,
Tursiops truncatus ENSTTRG00000003746 possible_ortholog 1 retrogene
retro_ttru_1416,
Vicugna pacos ENSVPAG00000008003 possible_ortholog 1 retrogene
retro_vpac_73,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_249 73.33 71.43
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2. retro_amel_778 66.99 99.05
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3. retro_amel_1921 75.74 63.81
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Download FASTA sequences of all ENSAMEG00000001020 retrocopies