Parental gene:

GSTP1, ENSOCUG00000002230

Aliases:None
Description:glutathione S-transferase pi 1 [Source:HGNC Symbol;Acc:4638]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:AAGW02081305:20347..24268(-)


>ENSOCUG00000002230
ATGCCGCCCTACACCATCGTCTACTTCCCAGTTCAAGGGCGCTGCGAGGCCATGCGCATGCTGCTGACCGACCAGGGCCA
GAGCTGGAAGGAGGAGGTGGTGAACCTGGAGACCTGGTCGCAGGGCTCCCTCAAGGCCTCCTGTCTGTACGGGCAGCTGC
CCAAGTTGCAGGACGGAGACCTCACCCTGTACCAGTCCAATGCCATCCTGCGCCACCTGGGCCGCACCCTCGGGATCTAT
GGGAAGGACCAGCGGGAGGCCGCCCTGCTGGACATGGTGAATGACGGCGTGGAGGACCTGCGCATCAAGTACATCACCCT
CATCTACACCAACTACGACGCGGGCAAGGACAGCTACGTGAAGGCCCTGCCCGGGCACCTCAAGCCTTTTGAGACCCTGC
TGTCCCAGAACAAGGATGGCAAGTCCTTCATCGTGGGCGACCAGATCTCCTTCGCCGACTACAACCTGCTGGACTTGTTG
CTAACGCACCAGATCCTGGCCCCCGGCTGCCTGGACGCCTTCCCCCTGCTCTCGGCCTACGTGGCCCGCCTCAGTGCCCG
GCCCAAGCTCAAGGCCTTCCTGGCCTCGCCCGAACACGTGAACCGCCCCATTAACGCCAACGGGAAAAAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 130 .02 RPM
SRP017611_kidney 230 .59 RPM
SRP017611_liver 8 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001020 possible_ortholog 3 retrogenes
retro_amel_1921, retro_amel_249, retro_amel_778,
Canis familiaris ENSCAFG00000011349 possible_ortholog 4 retrogenes
retro_cfam_143, retro_cfam_2043, retro_cfam_46, retro_cfam_617,
Callithrix jacchus ENSCJAG00000000879 ortholog_one2one 1 retrogene
retro_cjac_3321,
Macropus eugenii ENSMEUG00000001519 ortholog_one2many 2 retrogenes
retro_meug_1519, retro_meug_1762,
Mustela putorius furo ENSMPUG00000004029 possible_ortholog 2 retrogenes
retro_mputfur_1215, retro_mputfur_1463,
Mus musculus ENSMUSG00000038155 possible_ortholog 1 retrogene
retro_mmus_521,
Rattus norvegicus ENSRNOG00000018237 possible_ortholog 4 retrogenes
retro_rnor_2140, retro_rnor_2567, retro_rnor_2842, retro_rnor_769,
Tursiops truncatus ENSTTRG00000003746 ortholog_one2one 1 retrogene
retro_ttru_1416,
Vicugna pacos ENSVPAG00000008003 ortholog_one2one 1 retrogene
retro_vpac_73,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_391 58.54 94.29
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Download FASTA sequences of all ENSOCUG00000002230 retrocopies