Parental gene:

ENSACAG00000015685

Aliases:None
Description:Synaptosomal-associated protein [Source:UniProtKB/TrEMBL;Acc:G1KRG6]
Organism:Anole lizard (Anolis carolinensis)
Coordinates:1:39852053..39868936(-)


>ENSACAG00000015685
ATGGCTGAGTTGTCACCTGAAGATATTCAACTGAGAGCCCATCAAGTTACAGATGAGTCTTTGGAAAGCACAAGGAGGAT
TCTTGGCTTGGCTGTTGAGTCCCAAGATGCTGGAATCAAAACGATCTCCATGTTAGATGAACAAGGAGAACAGCTGAACC
GTATAGAAGAAGGAATGGACCAGATAAACAAAGACATGAGAGAAGCTGAGAAGAATTTAAAAGAACTCAATAAGTGTTGT
GGTCTCTGTGTCTGTCCTTGCAATAGAACGAAGAATTTTGAGTCTAGTAAATCATATAGAACAACATGGGGTGATGGAAT
GGAGAACTCCGGGGATCATGTAGTGTCTAAACAACCGGGGCGGACAATAGATTATCAGCAACAAGGCAGAGGAGGAAATT
CTGGGGGATACATTACACGGATAACAAATGATGCCAGAGAAGATGAAATGGATGAAAATCTAACCCAAGTAGGAAACATC
TTGGGGAACCTGAAAAATATGGCCTTGGATATGGGTAATGAGATTGATTCACAAAACAAGCAGATAGATCGGATAAATGA
GAAGGCTGAAACCAACAAGGATCGGATTATAATAGCCAATGAAAAAGCCCAAAAACTTATTGCTAACTAA

Library Parental gene expression (RPM)
SRP009831_adrenal 62 .79 RPM
SRP009831_brain 14 .58 RPM
SRP009831_dewlap 86 .40 RPM
SRP009831_embryo 29 .43 RPM
SRP009831_heart 54 .74 RPM
SRP009831_liver 57 .71 RPM
SRP009831_lung 87 .95 RPM
SRP009831_ovary 86 .79 RPM
SRP009831_skeletal_muscle 22 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015774 ortholog_one2many 1 retrogene
retro_amel_206,
Bos taurus ENSBTAG00000005661 ortholog_one2many 2 retrogenes
retro_btau_1622, retro_btau_371,
Canis familiaris ENSCAFG00000011105 ortholog_one2many 2 retrogenes
retro_cfam_1073, retro_cfam_1780,
Choloepus hoffmanni ENSCHOG00000006468 ortholog_many2many 3 retrogenes
retro_chof_1, retro_chof_1652, retro_chof_1784,
Cavia porcellus ENSCPOG00000003638 ortholog_one2many 1 retrogene
retro_cpor_862,
Felis catus ENSFCAG00000013387 ortholog_one2many 1 retrogene
retro_fcat_1114,
Loxodonta africana ENSLAFG00000005462 ortholog_one2many 1 retrogene
retro_lafr_839,
Microcebus murinus ENSMICG00000000813 ortholog_one2many 2 retrogenes
retro_mmur_1188, retro_mmur_377,
Monodelphis domestica ENSMODG00000017889 ortholog_one2many 1 retrogene
retro_mdom_1772,
Mustela putorius furo ENSMPUG00000009856 ortholog_one2many 3 retrogenes
retro_mputfur_1181, retro_mputfur_692, retro_mputfur_915,
Mus musculus ENSMUSG00000027287 ortholog_one2many 1 retrogene
retro_mmus_2570,
Rattus norvegicus ENSRNOG00000050552 ortholog_one2many 2 retrogenes
retro_rnor_1505, retro_rnor_2389,
Tarsius syrichta ENSTSYG00000006589 ortholog_one2many 2 retrogenes
retro_tsyr_1020, retro_tsyr_715,
Tursiops truncatus ENSTTRG00000002561 ortholog_one2many 1 retrogene
retro_ttru_658,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_38 58.33 56.94
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Download FASTA sequences of all ENSACAG00000015685 retrocopies