Parental gene:

VIT_05s0020g02560

Aliases:None
Description:None
Organism:Grape (Vitis vinifera)
Coordinates:5:4233938..4240128(+)


>VIT_05s0020g02560
ATGGGTTCTCTCACGAATGGTATTGATAAAAGACCAGATGAAGAACAAGAGGAAGAGCCTATCTTGATGAAGAATTCACA
GAGATTTTGTATGTTCCCCATCAGATACAGGCAACTCTGGGAGATGTACAAGAAGGCTGAAGCCAGTTTCTGGACTGCTG
AGGAAGTTGACCTCTCCCATGATGTGCAGCAGTGGGAAAGCCTGTCCAATTCTGAGAAACACTTCATAAGCCATGTATTA
GCATTTTTTGCTGCATCTGATGGGATTGTTTTGGAGAACTTGGCTGCAAGATTTCTACATGATATTCAAATTCCAGAAGC
ACGGGCATTTTATGGATTTCAAATTGCTATGGAGAATATTCATTCTGAGATGTACAGTTTGCTCTTGGAGACATATATCA
AGGACTCAAAGGAGAAGCATAGATTGTTTAATGCAATTGAAAGCATATCTTGTGTAGCTGGGAAGGCTAAATGGGCTTTG
GATTGGATTCAGAGTTCCACTTTATTTGCTGAGAGACTTATTGCCTTTGCATGTGTTGAAGGAATCTTTTTCTCAGGAAG
CTTCTGCGCCATTTTTTGGCTTAAAAAGAGAGGATTGATGCCAGGTTTGACTTTCTCAAATGAGCTTATTTCTAGAGATG
AGGGCCTTCACTGCGATTTTGCTTGCCTTCTGTACAGTTTATTACAGAAGCAGCTACCCTGGCAAAAGGTTCATCACATT
GTCCATGAAGCAGTGGAAATTGAAACCCAGTTCGTTTGCGAAGCCCTGCCTTGTGCATTGATTGGCATGAACGCAACACT
CATGAGCCAGTACATAAAATTTGTCGCTGACCGCCTTTTGGTTGCCCTTGGGTATGAGAGGAAATACAACGTGGAAAATC
CATTTGATTGGATGGAGTTTATTTCTTTGCAATGCTCAAGGCTCAATCTTGTAATTATCCCATTAGTTAAAGTTTTCACA
TGGGGATGTGCAAGATGGAATCTGGAACTACAGGATGAAAGTGATGGGGTAAAGCAAACTTCTTTGAGAGAAGGGTGGGT
GATTATCAAAAGGCATCTATAA

Species Parental gene accession Homology type Retrogenes number
Amborella trichopoda AMTR_s00025p00110680 ortholog_one2many 1 retrogene
retro_atri_2,
Brassica rapa Bra014962 ortholog_one2many 1 retrogene
retro_brap_7,
Prunus persica PRUPE_ppa008063mg ortholog_one2many 1 retrogene
retro_pper_7,
Solanum lycopersicum Solyc01g080210.2 ortholog_one2many 1 retrogene
retro_slyc_6,
Theobroma cacao TCM_020494 ortholog_one2many 1 retrogene
retro_tcac_4,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vvin_20 76.66 81.30
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Download FASTA sequences of all VIT_05s0020g02560 retrocopies