Parental gene: | Solyc08g005470.2 |
| Aliases: | None |
| Description: | None |
| Organism: | Tomato (Solanum lycopersicum) |
| Coordinates: | 8:347998..354065(-) |
>Solyc08g005470.2
ATGGAAAGGTACAAGGTAATTAAGGAAGTTGGTAATGGTACATTTGGTAGTGTGTGGCGAGCTTTAAATAAACAGTCTGG
TGAAGTGGTTGCAATTAAGAAAATGAAGAAGAAGTATTATTCATGGGAAGAATGCATCAACTTGAGAGAAGTCAAGTCAT
TGAGGAAAATGAGTCATCCAAATATCGTTAAGCTCAAGGAAGTGATTAGGGAGAATGACATATTATACTTTGTGTTCGAA
TACATGGAGTGCAACTTATATCACCTTATGAAAGATAGGCCTAAGCTTTTCTTAGAATCAGAAGTGAGAAATTGGTGCTT
CCAAATATTTCAAGGTCTTGCAAACATGCATCAACGTGGATATTTCCATCGTGACCTTAAGCCAGAGAACTTGCTGGTTT
CAAAAGATACAATAAAAATTGCTGATTTCGGTCTTGCTCGGGAGATCAATTCTAAGCCCCCATATACAGAATATGTCTCA
ACACGCTGGTATCGTGCCCCTGAAGTTCTTCTACAATCACCAATATATGGTCCTGCTGTCGATATGTGGGCAATGGGTGC
AATAATGGCTGAGCTATTAACTCTCCGTCCTCTATTCCCTGGTTCAAGTGAAGCAGATGAGATTTACAAAATATGCAGTG
TTATAGGTACTCCATCAAAGAGTGAATGGGCTCATGGGCACGAACTTGCTGGTGCTATCAATTATCAGTTTCCACAGATG
CCTGGTGTAAATCTGTCTGTATTACTCCCATCTGCCAGTGAGGATGCAATTAATCTAATCACTTCACTTTGTTCGTGGGA
TCCTTGCAAGAGGCCAACTGCGGTTGAAGTACTTCAGCACCGTTTCTTTCAGAGTTGCTTTTATGTACCTCCATCATTAC
GCTCTAAGACTGCTGTCTCTAAGACGCCTCCATCTGCTGGAATGAAGGGTTCCTCAGAGCAAAAAACCAACAGGTGGTCT
TCCAGTACTTTAACCAACCCAAAGGCTAGTAGCAGCTTTTCTCCCGTCAAGTCTCAATTTAGCCCAGCAGGTGTCCAGAG
GAAGTTGCAAATGAATTATCAGGATGCAACTAGGAATGATAAACCCCTGAAAGGGTCTTCTATTAAACAACAACCAGCAA
AATATCGTCCTCCTGCAAGGAATATCCCCTTGGTTGGTTCCACGGTGAAAACTCGTGTCTCTGATGCTGCTGAGAAGCTT
GGCAACATGAGCATTGGCTCTGGTAGAGCATCTATAAAGCAGCCATTCCCTCAACCCATGAAGGCTGGAGGGTTACATGG
GCAGCATGACTTGTTCTTGGGACGATCTCAAGATATTCTGCCTGGAAGAAGCTTTTCAAGGAAAGTCGCTGGGTAA
ATGGAAAGGTACAAGGTAATTAAGGAAGTTGGTAATGGTACATTTGGTAGTGTGTGGCGAGCTTTAAATAAACAGTCTGG
TGAAGTGGTTGCAATTAAGAAAATGAAGAAGAAGTATTATTCATGGGAAGAATGCATCAACTTGAGAGAAGTCAAGTCAT
TGAGGAAAATGAGTCATCCAAATATCGTTAAGCTCAAGGAAGTGATTAGGGAGAATGACATATTATACTTTGTGTTCGAA
TACATGGAGTGCAACTTATATCACCTTATGAAAGATAGGCCTAAGCTTTTCTTAGAATCAGAAGTGAGAAATTGGTGCTT
CCAAATATTTCAAGGTCTTGCAAACATGCATCAACGTGGATATTTCCATCGTGACCTTAAGCCAGAGAACTTGCTGGTTT
CAAAAGATACAATAAAAATTGCTGATTTCGGTCTTGCTCGGGAGATCAATTCTAAGCCCCCATATACAGAATATGTCTCA
ACACGCTGGTATCGTGCCCCTGAAGTTCTTCTACAATCACCAATATATGGTCCTGCTGTCGATATGTGGGCAATGGGTGC
AATAATGGCTGAGCTATTAACTCTCCGTCCTCTATTCCCTGGTTCAAGTGAAGCAGATGAGATTTACAAAATATGCAGTG
TTATAGGTACTCCATCAAAGAGTGAATGGGCTCATGGGCACGAACTTGCTGGTGCTATCAATTATCAGTTTCCACAGATG
CCTGGTGTAAATCTGTCTGTATTACTCCCATCTGCCAGTGAGGATGCAATTAATCTAATCACTTCACTTTGTTCGTGGGA
TCCTTGCAAGAGGCCAACTGCGGTTGAAGTACTTCAGCACCGTTTCTTTCAGAGTTGCTTTTATGTACCTCCATCATTAC
GCTCTAAGACTGCTGTCTCTAAGACGCCTCCATCTGCTGGAATGAAGGGTTCCTCAGAGCAAAAAACCAACAGGTGGTCT
TCCAGTACTTTAACCAACCCAAAGGCTAGTAGCAGCTTTTCTCCCGTCAAGTCTCAATTTAGCCCAGCAGGTGTCCAGAG
GAAGTTGCAAATGAATTATCAGGATGCAACTAGGAATGATAAACCCCTGAAAGGGTCTTCTATTAAACAACAACCAGCAA
AATATCGTCCTCCTGCAAGGAATATCCCCTTGGTTGGTTCCACGGTGAAAACTCGTGTCTCTGATGCTGCTGAGAAGCTT
GGCAACATGAGCATTGGCTCTGGTAGAGCATCTATAAAGCAGCCATTCCCTCAACCCATGAAGGCTGGAGGGTTACATGG
GCAGCATGACTTGTTCTTGGGACGATCTCAAGATATTCTGCCTGGAAGAAGCTTTTCAAGGAAAGTCGCTGGGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Solanum tuberosum | PGSC0003DMG400018466 | ortholog_one2one | 1 retrogene | |
| Vitis vinifera | VIT_02s0033g01110 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_slyc_24 | 84.79 | 68.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Solyc08g005470.2 retrocopies