Parental gene: | ORGLA04G0190200 |
| Aliases: | None |
| Description: | None |
| Organism: | African rice (Oryza glaberrima) |
| Coordinates: | 4:20407125..20408926(-) |
>ORGLA04G0190200
ATGGCTGCGGTGGCGAATGGCGGTGCTGCGCCGGAGTGGCGGGTGACGGTGCCGGAGGGCGCGACGGTGACGGTGGAGCG
CGAGGCCGGCCGCTGCCGGCGGGCCGCCGTGGCGTGGGCGTGGCAGCTGGTTTCCTGCGTCGCCGCGCTCGGGAGCAGGG
CGTCCGGCCTCGCCGGGCGTGTCTGGAAGATCGGCGCGGACGACCCCCGGAGGGCGGTGCACGGCGTCAAGGTCGGCCTC
GCGCTCGCCCTCGTCTCCGTGTTCTACTACACCAGGCCCCTCTACGACGGCGTCGGCGGCGCCGCCATGTGGGCCGTCAT
GACCGTCGTCGTCGTCTTCGAGTTCACCGTTGGTGGCTGTGTGTACAAGGGGTTCAACCGGGCCACGGCGACGGTGAGCG
CCGGGGCGGTCGCGCTCGGCGTGCACTGGATCGCGAGCAAGTCCGGCGACAAGCTCGAGCCGGTCGTCCGCAGCGGCTCG
GTTTTCCTTCTTGCCGCGGCGGCGACGTTCTCGCGGTTCATACCGACGGTGAAGGCGCGGTTCGACTACGGGGTGACCAT
CTTCATCCTGACGTACAGCCTGGTGGCCGTGTCGGGGTACCGCGTGGACGCGCTGGTGGCGATGGCGCAGCAGCGGGTCT
CCACCATCGCCATCGGCATCTTCATCTGCCTCGCCGTCTGCGTGCTCATCTGCCCCGTGTGGGCCGGGCAGGAGCTGCAC
CGCCTCACCGCCCGCAACATGGACAAGCTCGCCGGCGCCGTCGAGGCCTGCGTCGAGGGCTACTTCGTCGCGGGAGAGGA
GGAGGCGGCGGGGCCGGAGTACAAGCGGCGGCCGGCGGCTGCTGCGGCGGCGGAGGGGTACAAGTGCGTGCTCAACTCCA
AGGCGTCCGAGGACGCGCAGGCGAACCTGGCGCGGTGGGAGCCCGCGCACGGCAGGTTCGGCTTCCGCCACCCGTACGCA
CAGTACAAGGCCGTCGGCGCCGCCATGCGCCACTGCGCGTACTGCGTCGAGGCCCTGAGCGGCTGCATCCGCTCCGCGGA
GGCCCAGTCGCCCGAGGGCGTCAAGCGCCACCTCGCCGGCGCGTCCACGAGGGTGGCGACGCGGTGCGCGGCGGTGCTCA
GGGAGGCCTCGAGCTCCGTCGCCGCGATGACGACGCCGTCCCGGGGCCTCGACTTCGCCGTGGCGGACATGAACACCGCC
GTTCAGGAGCTCCAGAGCGAGGTGCGGGAGCTCCCGTCCAAGCTGGCCGCCGCCGCCGGGGAGCCGGCCGCGGCGCAGCA
GCTGATGGACGCCGTGCAGCTGCTCACGGTGACCTCGCTGCTGATCGAGGTGTCGGCGAGGATCGAGGGCGTCGTGGACG
CCGTCGACACGCTCGCCACCCTCGCGGCGTTCAGATCAGCTGACGACGACGACGACGACGAAAAGCCAGCAACAGAAGCA
GATGCCAAGCTGCAAACCGTGAGCGATCACGTCACGGTCGAACCGGAAGCGGCTGCGGCTGCGGCTGCGGCTCGGACAAC
AAAGAACATTGAACAAGTTTAA
ATGGCTGCGGTGGCGAATGGCGGTGCTGCGCCGGAGTGGCGGGTGACGGTGCCGGAGGGCGCGACGGTGACGGTGGAGCG
CGAGGCCGGCCGCTGCCGGCGGGCCGCCGTGGCGTGGGCGTGGCAGCTGGTTTCCTGCGTCGCCGCGCTCGGGAGCAGGG
CGTCCGGCCTCGCCGGGCGTGTCTGGAAGATCGGCGCGGACGACCCCCGGAGGGCGGTGCACGGCGTCAAGGTCGGCCTC
GCGCTCGCCCTCGTCTCCGTGTTCTACTACACCAGGCCCCTCTACGACGGCGTCGGCGGCGCCGCCATGTGGGCCGTCAT
GACCGTCGTCGTCGTCTTCGAGTTCACCGTTGGTGGCTGTGTGTACAAGGGGTTCAACCGGGCCACGGCGACGGTGAGCG
CCGGGGCGGTCGCGCTCGGCGTGCACTGGATCGCGAGCAAGTCCGGCGACAAGCTCGAGCCGGTCGTCCGCAGCGGCTCG
GTTTTCCTTCTTGCCGCGGCGGCGACGTTCTCGCGGTTCATACCGACGGTGAAGGCGCGGTTCGACTACGGGGTGACCAT
CTTCATCCTGACGTACAGCCTGGTGGCCGTGTCGGGGTACCGCGTGGACGCGCTGGTGGCGATGGCGCAGCAGCGGGTCT
CCACCATCGCCATCGGCATCTTCATCTGCCTCGCCGTCTGCGTGCTCATCTGCCCCGTGTGGGCCGGGCAGGAGCTGCAC
CGCCTCACCGCCCGCAACATGGACAAGCTCGCCGGCGCCGTCGAGGCCTGCGTCGAGGGCTACTTCGTCGCGGGAGAGGA
GGAGGCGGCGGGGCCGGAGTACAAGCGGCGGCCGGCGGCTGCTGCGGCGGCGGAGGGGTACAAGTGCGTGCTCAACTCCA
AGGCGTCCGAGGACGCGCAGGCGAACCTGGCGCGGTGGGAGCCCGCGCACGGCAGGTTCGGCTTCCGCCACCCGTACGCA
CAGTACAAGGCCGTCGGCGCCGCCATGCGCCACTGCGCGTACTGCGTCGAGGCCCTGAGCGGCTGCATCCGCTCCGCGGA
GGCCCAGTCGCCCGAGGGCGTCAAGCGCCACCTCGCCGGCGCGTCCACGAGGGTGGCGACGCGGTGCGCGGCGGTGCTCA
GGGAGGCCTCGAGCTCCGTCGCCGCGATGACGACGCCGTCCCGGGGCCTCGACTTCGCCGTGGCGGACATGAACACCGCC
GTTCAGGAGCTCCAGAGCGAGGTGCGGGAGCTCCCGTCCAAGCTGGCCGCCGCCGCCGGGGAGCCGGCCGCGGCGCAGCA
GCTGATGGACGCCGTGCAGCTGCTCACGGTGACCTCGCTGCTGATCGAGGTGTCGGCGAGGATCGAGGGCGTCGTGGACG
CCGTCGACACGCTCGCCACCCTCGCGGCGTTCAGATCAGCTGACGACGACGACGACGACGAAAAGCCAGCAACAGAAGCA
GATGCCAAGCTGCAAACCGTGAGCGATCACGTCACGGTCGAACCGGAAGCGGCTGCGGCTGCGGCTGCGGCTCGGACAAC
AAAGAACATTGAACAAGTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA014531 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM04G22000 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI04G18490 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA04G20520 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC04G19720 | ortholog_one2many | 1 retrogene | |
| Oryza sativa japonica | OS04G0567200 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogla_38 | 61.81 | 77.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ORGLA04G0190200 retrocopies