Parental gene: | ONIVA04G20520 |
| Aliases: | None |
| Description: | None |
| Organism: | Indian wild rice (Oryza nivara) |
| Coordinates: | 4:21234035..21235827(-) |
>ONIVA04G20520
ATGGCTGCGGTGGCGAATGGCGGTGCTGCGCCGGAGTGGCGGGTGACGGTGCCGGAGGGCGCGACGGTGACGGTGGAGCG
CGAGGCCGGCCGCTGCCGGCGGGCCGCCGTGGTGTGGGCGTGGCAGCTGGTTTCCTGCGTCGCCGCGCTCGGGAGCAGGG
CGTCCGGCCTCGCCGGGCGTGTCTGGAAGATCGGCGCGGACGACCCCCGGAGGGCGGTGCACGGCGTCAAGGTCGGCCTC
GCGCTCGCCCTCGTCTCCGTGTTCTACTACACCAGGCCCCTCTACGACGGCGTCGGCGGCGCCGCCATGTGGGCCGTCAT
GACCGTCGTCGTCGTCTTCGAGTTCACCGTTGGTGGCTGTGTGTACAAGGGGTTCAACCGGGCCACGGCGACGGTGAGCG
CCGGGGTGGTCGCGCTCGGCGTGCACTGGATCGCGAGCAAGTCCGGCGACAAGCTCGAGCCGGTCGTCCGCAGCGGCTCG
GTTTTCCTTCTTGCCGCGGCGGCGACGTTCTCGCGGTTCATACCGACGGTGAAGGCGCGGTTCGACTACGGGGTGACCAT
CTTCATCCTGACGTACAGCCTGGTGGCCGTGTCGGGGTACCGCGTGGACGCGCTGGTGGCGATGGCGCAGCAGCGGGTCT
CCACCATCGCCATCGGCATCTTCATCTGCCTCGCCGTCTGCGTGCTCATCTGCCCCGTGTGGGCCGGGCAGGAGCTGCAC
CGCCTCACCGCCCGCAACATGGACAAGCTCGCCGGCGCCGTCGAGGCCTGCGTCGAGGGCTACTTCGTCGCGGGAGAGGA
GGTGGCGGCGGGGCCGGAGTACAAGCGGCGGCCGGCGGCTGCTGCGGCGGCGGAGGGGTACAAGTGCGTGCTCAACTCCA
AGGCGTCCGAGGACGCGCAGGCGAACCTGGCGCGGTGGGAGCCCGCGCACGGCAGGTTCGGCTTCCGCCACCCGTACGCA
CAGTACAAGGCCGTCGGCGCCGCCATGCGCCACTGCGCGTACTGCGTCGAGGCCCTGAGCGGCTGCATCCGCTCCGCGGA
GGCCCAGTCGCCCGAGGGCGTCAAGCGCCACCTCGCCGGCGCGTCCACGAGGGTGGCGACGCGGTGCGCGGCGGTGCTCA
GGGAGGCCTCGAGCTCCGTCGCCGCGATGACGACGCCGTCCCGGGGCCTCGACTTCGCCGTGGCGGACATGAACACCGCC
GTTCAGGAGCTCCAGAGCGAGGTGCGGGAGCTCCCGTCCAAGCTGGCCGCCGCCGCCGGGGAGCCGGCCGCGGCGCAGCA
GCTGATGGACGCCGTGCAGCTGCTCACGGTGACCTCGCTGCTGATCGAGGTGTCGGCGAGGATCGAGGGCGTCGTGGACG
CCGTCGACACGCTCGCCACCCTCGCGGCGTTCAGATCAGCTGACGACGACGAAAAGCCGACAACAGAAGCAGATGCCAAG
CTGCAAACCGTGAGCGATCACGTCACGGTCGAACCGGAAGCGGCTGCGGCTGCGGCTGCGGCTCGGACAACAAAGAACAT
TGAACAAGTTTAA
ATGGCTGCGGTGGCGAATGGCGGTGCTGCGCCGGAGTGGCGGGTGACGGTGCCGGAGGGCGCGACGGTGACGGTGGAGCG
CGAGGCCGGCCGCTGCCGGCGGGCCGCCGTGGTGTGGGCGTGGCAGCTGGTTTCCTGCGTCGCCGCGCTCGGGAGCAGGG
CGTCCGGCCTCGCCGGGCGTGTCTGGAAGATCGGCGCGGACGACCCCCGGAGGGCGGTGCACGGCGTCAAGGTCGGCCTC
GCGCTCGCCCTCGTCTCCGTGTTCTACTACACCAGGCCCCTCTACGACGGCGTCGGCGGCGCCGCCATGTGGGCCGTCAT
GACCGTCGTCGTCGTCTTCGAGTTCACCGTTGGTGGCTGTGTGTACAAGGGGTTCAACCGGGCCACGGCGACGGTGAGCG
CCGGGGTGGTCGCGCTCGGCGTGCACTGGATCGCGAGCAAGTCCGGCGACAAGCTCGAGCCGGTCGTCCGCAGCGGCTCG
GTTTTCCTTCTTGCCGCGGCGGCGACGTTCTCGCGGTTCATACCGACGGTGAAGGCGCGGTTCGACTACGGGGTGACCAT
CTTCATCCTGACGTACAGCCTGGTGGCCGTGTCGGGGTACCGCGTGGACGCGCTGGTGGCGATGGCGCAGCAGCGGGTCT
CCACCATCGCCATCGGCATCTTCATCTGCCTCGCCGTCTGCGTGCTCATCTGCCCCGTGTGGGCCGGGCAGGAGCTGCAC
CGCCTCACCGCCCGCAACATGGACAAGCTCGCCGGCGCCGTCGAGGCCTGCGTCGAGGGCTACTTCGTCGCGGGAGAGGA
GGTGGCGGCGGGGCCGGAGTACAAGCGGCGGCCGGCGGCTGCTGCGGCGGCGGAGGGGTACAAGTGCGTGCTCAACTCCA
AGGCGTCCGAGGACGCGCAGGCGAACCTGGCGCGGTGGGAGCCCGCGCACGGCAGGTTCGGCTTCCGCCACCCGTACGCA
CAGTACAAGGCCGTCGGCGCCGCCATGCGCCACTGCGCGTACTGCGTCGAGGCCCTGAGCGGCTGCATCCGCTCCGCGGA
GGCCCAGTCGCCCGAGGGCGTCAAGCGCCACCTCGCCGGCGCGTCCACGAGGGTGGCGACGCGGTGCGCGGCGGTGCTCA
GGGAGGCCTCGAGCTCCGTCGCCGCGATGACGACGCCGTCCCGGGGCCTCGACTTCGCCGTGGCGGACATGAACACCGCC
GTTCAGGAGCTCCAGAGCGAGGTGCGGGAGCTCCCGTCCAAGCTGGCCGCCGCCGCCGGGGAGCCGGCCGCGGCGCAGCA
GCTGATGGACGCCGTGCAGCTGCTCACGGTGACCTCGCTGCTGATCGAGGTGTCGGCGAGGATCGAGGGCGTCGTGGACG
CCGTCGACACGCTCGCCACCCTCGCGGCGTTCAGATCAGCTGACGACGACGAAAAGCCGACAACAGAAGCAGATGCCAAG
CTGCAAACCGTGAGCGATCACGTCACGGTCGAACCGGAAGCGGCTGCGGCTGCGGCTGCGGCTCGGACAACAAAGAACAT
TGAACAAGTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA014531 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM04G22000 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI04G18490 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC04G19720 | ortholog_one2many | 1 retrogene | |
| Oryza glaberrima | ORGLA04G0190200 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS04G0567200 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oniv_18 | 65.03 | 71.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ONIVA04G20520 retrocopies