Parental gene: | OMERI01G18100, OMERI01G18100 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza meridionalis |
| Coordinates: | 1:19348879..19355207(+) |
>OMERI01G18100
ATGGCGGCGCGCGCTCGCCTTGTCCTGCCCCCGCTCGCGGCGCTGCTCCTCTTCGCGCACCTCGCCGTCGCGGTGGCGCG
GCCGCGGTGGGAGGAGGAGGACAACCTCCGCCTGCCGTCGGAGCGCGCCGTGGCGGCGGCGGCGGACGACGCCGCCGAGG
CCGCCGAGGGCACCAGGTGGGCCGTCCTCATCGCCGGCTCCAACGGCTACTACAACTACCGCCACCAGGCGGATGTCTGC
CATGCCTACCAGATCATGAAGAGGGGCGGACTCAAGGACGAGAACATCATCGTCTTCATGTACGATGACATCGCGCACAA
CCCGGAGAATCCGAGGCCTGGTGTCATCATCAACCATCCCCAGGGTGGCGATGTCTATGCTGGGGTCCCGAAGGATTACA
CTGGGAAGGAGGTTAATGTCAAGAACTTGTTTGCTGTTCTGCTCGGTAACAAAACTGCTGTCAAAGGTGGGAGTGGCAAA
GTCCTGGACAGTGGCCCTAACGATCATATTTTCATTTTTTACAGTGATCATGGGGGTCCTGGTGTCCTTGGGATGCCAAC
CTATCCATACCTCTACGGTGATGATCTTGTAGATGTTCTGAAGAAGAAGCATGCTGCTGGGACGTACAAAAGCCTGGTCT
TTTACCTTGAAGCCTGTGAATCTGGAAGCATCTTTGAGGGTCTATTGCCAAATGACATCAATGTTTATGCCACCACTGCA
TCAAACGCTGATGAGAGCAGCTGGGGAACATACTGCCCCGGGGAGTACCCGAGCCCACCTCCGGAGTACGACACATGCCT
GGGGGACTTGTACAGTGTTGCTTGGATGGAAGACAGCGATGTCCACAACCTGAGAACTGAATCACTCAAGCAGCAGTACA
ATCTCGTCAAGGAAAGGACATCTGTGCAGCACACATATTACTCTGGGTCACATGTGATGGAATACGGTTCTTTAGAGCTG
AATGCCCATCATGTGTTCATGTACATGGGTTCCAATCCGGCTAACGACAATGCTACATTTGTGGAAGATAACTCGTTGCC
ATCGTTCTCAAGGGCTGTTAATCAGCGGGATGCTGACCTGGTTTACTTCTGGCAGAAGTACCGCAAATTGGCTGAGAGTT
CTCCTGAGAAAAACGAAGCTCGGAAGCAATTGCTTGAAATGATGGCACACAGATCTCATGTTGACAGCAGTGTTGAGCTG
ATCGGAAACCTTCTCTTTGGCTCTGAGGAAGGCCCAAGGGTTCTAAAGGCTGTTCGTGCAACTGGTGAACCTCTTGTTGA
TGACTGGAGCTGTCTCAAGTCTAAGGTACGCGCTTTCGAAGCACAATGCGGCTCGCTAGCGCAGTATGGAATGAAGCATA
TGCGTTCCTTTGCAAACATCTGCAATGCTGGCATCTCTGCTGAAGCGATGGCAAAGGTTGCTGCGCAGGCTTGCACCAGC
ATTCCCTCCAACCCCTGGAGTTCCACCCATAGGGGTTTTAGTGCTTAA
ATGGCGGCGCGCGCTCGCCTTGTCCTGCCCCCGCTCGCGGCGCTGCTCCTCTTCGCGCACCTCGCCGTCGCGGTGGCGCG
GCCGCGGTGGGAGGAGGAGGACAACCTCCGCCTGCCGTCGGAGCGCGCCGTGGCGGCGGCGGCGGACGACGCCGCCGAGG
CCGCCGAGGGCACCAGGTGGGCCGTCCTCATCGCCGGCTCCAACGGCTACTACAACTACCGCCACCAGGCGGATGTCTGC
CATGCCTACCAGATCATGAAGAGGGGCGGACTCAAGGACGAGAACATCATCGTCTTCATGTACGATGACATCGCGCACAA
CCCGGAGAATCCGAGGCCTGGTGTCATCATCAACCATCCCCAGGGTGGCGATGTCTATGCTGGGGTCCCGAAGGATTACA
CTGGGAAGGAGGTTAATGTCAAGAACTTGTTTGCTGTTCTGCTCGGTAACAAAACTGCTGTCAAAGGTGGGAGTGGCAAA
GTCCTGGACAGTGGCCCTAACGATCATATTTTCATTTTTTACAGTGATCATGGGGGTCCTGGTGTCCTTGGGATGCCAAC
CTATCCATACCTCTACGGTGATGATCTTGTAGATGTTCTGAAGAAGAAGCATGCTGCTGGGACGTACAAAAGCCTGGTCT
TTTACCTTGAAGCCTGTGAATCTGGAAGCATCTTTGAGGGTCTATTGCCAAATGACATCAATGTTTATGCCACCACTGCA
TCAAACGCTGATGAGAGCAGCTGGGGAACATACTGCCCCGGGGAGTACCCGAGCCCACCTCCGGAGTACGACACATGCCT
GGGGGACTTGTACAGTGTTGCTTGGATGGAAGACAGCGATGTCCACAACCTGAGAACTGAATCACTCAAGCAGCAGTACA
ATCTCGTCAAGGAAAGGACATCTGTGCAGCACACATATTACTCTGGGTCACATGTGATGGAATACGGTTCTTTAGAGCTG
AATGCCCATCATGTGTTCATGTACATGGGTTCCAATCCGGCTAACGACAATGCTACATTTGTGGAAGATAACTCGTTGCC
ATCGTTCTCAAGGGCTGTTAATCAGCGGGATGCTGACCTGGTTTACTTCTGGCAGAAGTACCGCAAATTGGCTGAGAGTT
CTCCTGAGAAAAACGAAGCTCGGAAGCAATTGCTTGAAATGATGGCACACAGATCTCATGTTGACAGCAGTGTTGAGCTG
ATCGGAAACCTTCTCTTTGGCTCTGAGGAAGGCCCAAGGGTTCTAAAGGCTGTTCGTGCAACTGGTGAACCTCTTGTTGA
TGACTGGAGCTGTCTCAAGTCTAAGGTACGCGCTTTCGAAGCACAATGCGGCTCGCTAGCGCAGTATGGAATGAAGCATA
TGCGTTCCTTTGCAAACATCTGCAATGCTGGCATCTCTGCTGAAGCGATGGCAAAGGTTGCTGCGCAGGCTTGCACCAGC
ATTCCCTCCAACCCCTGGAGTTCCACCCATAGGGGTTTTAGTGCTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Zea mays | GRMZM2G093032 | ortholog_one2many | 1 retrogene | |
| Oryza longistaminata | KN538817.1_FG009 | ortholog_one2one | 1 retrogene | |
| Oryza brachyantha | OB01G29280 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART01G19640 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM01G23260 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC01G20010 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0161200 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0559600 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_omer_24 | 69.23 | 56.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OMERI01G18100 retrocopies