Parental gene: | GRMZM2G093032 |
| Aliases: | None |
| Description: | None |
| Organism: | Maize (Zea mays) |
| Coordinates: | 3:225910754..225916465(-) |
>GRMZM2G093032
ATGGTGGCCGATCGCCTCCGCCTCGCGCTGCTGCTCTCCGCGTGCCTCTGCTCCGCGTGGGCGCGCCCACGCCTCGAGCC
GACCATCCGCCTGCCGTCCGAGCGCGCGGCGGCCGACGACGCCGTCGGGACCCGGTGGGCCGTGCTCATCGCCGGCTCCA
ACGGCTACTACAACTACCGCCACCAGGCGGACATCTGCCATGCATACCAGATCATGAAGAAGGGCGGACTTAAGGACGAG
AACATCGTTGTCTTCATGTACGATGACATCGCGCATAGCCCGGAAAATCCGAGGCCTGGTGTCATCATAAATCATCCCCA
GGGTGGCGACGTCTATGCTGGGGTGCCAAAGGATTACACTGGGCGAGAGGTCAACGTCGACAATTTCTTCGCTGTTCTGC
TTGGCAACAAAACTGCTCTCAGGGGTGGGAGCGGCAAGGTTGTGGACAGTGGCCCCAATGACCATATATTTGTTTTCTAC
AGTGACCATGGGGGTCCTGGCGTCCTTGGAATGCCTACGTATCCATATCTCTATGGTGATGACCTCGTAGATGTCCTGAA
GAAGAAGCATGCTGCCGGGACCTACAAAAGCCTGGTCTTTTATCTTGAAGCATGCGAATCTGGGAGCATCTTTGAGGGCC
TCCTGCCGAATGACATAAATGTGTATGCGACCACCGCGTCAAATGCAGAGGAGAGTAGCTGGGGGACGTACTGCCCTGGC
GAGTTCCCGAGCCCTCCACCGGAGTATGACACTTGCTTGGGAGACCTGTATAGTGTTGCTTGGATGGAAGACAGTGATTT
CCACAATCTGCGAACTGAATCTCTCAAGCAGCAATACAACTTGGTCAAGGATAGGACAGCGGTTCAGGATACATTCAGCT
ATGGCTCCCATGTGATGCAATATGGTTCATTGGAGTTGAATGTTAAGCATCTGTTTTCGTACATTGGCACAAACCCTGCT
AACGATGACAACACGTTTATAGAAGACAACTCGTTGCCATCGTTCTCAAAGGCTGTTAATCAGCGCGACGCTGACCTTGT
CTACTTCTGGCAGAAGTACCGGAAATTGGCAGACAGCTCACCTGAGAAAAATGAAGCTCGGAAGGAGTTGCTTGAAGTGA
TGGCCCACAGGTCTCATGTTGACAGCAGTGTTGAGCTCATTGGAAGCCTTCTCTTTGGCTCTGAGGACGGTCCAAGGGTT
CTGAAAGCCGTCCGTGCAGCTGGTGAGCCTCTGGTCGATGATTGGAGCTGTCTCAAGTCCACGGTTCGTACTTTTGAGGC
GCAATGTGGGTCGTTGGCGCAGTATGGGATGAAGCACATGCGGTCCTTCGCAAACATCTGCAACGCTGGCATCCTTCCTG
AAGCAGTGTCGAAGGTCGCTGCTCAGGCTTGCACCAGCATTCCTTCCAACCCCTGGAGTTCTATCCACAAGGGTTTTAGC
GCCTAA
ATGGTGGCCGATCGCCTCCGCCTCGCGCTGCTGCTCTCCGCGTGCCTCTGCTCCGCGTGGGCGCGCCCACGCCTCGAGCC
GACCATCCGCCTGCCGTCCGAGCGCGCGGCGGCCGACGACGCCGTCGGGACCCGGTGGGCCGTGCTCATCGCCGGCTCCA
ACGGCTACTACAACTACCGCCACCAGGCGGACATCTGCCATGCATACCAGATCATGAAGAAGGGCGGACTTAAGGACGAG
AACATCGTTGTCTTCATGTACGATGACATCGCGCATAGCCCGGAAAATCCGAGGCCTGGTGTCATCATAAATCATCCCCA
GGGTGGCGACGTCTATGCTGGGGTGCCAAAGGATTACACTGGGCGAGAGGTCAACGTCGACAATTTCTTCGCTGTTCTGC
TTGGCAACAAAACTGCTCTCAGGGGTGGGAGCGGCAAGGTTGTGGACAGTGGCCCCAATGACCATATATTTGTTTTCTAC
AGTGACCATGGGGGTCCTGGCGTCCTTGGAATGCCTACGTATCCATATCTCTATGGTGATGACCTCGTAGATGTCCTGAA
GAAGAAGCATGCTGCCGGGACCTACAAAAGCCTGGTCTTTTATCTTGAAGCATGCGAATCTGGGAGCATCTTTGAGGGCC
TCCTGCCGAATGACATAAATGTGTATGCGACCACCGCGTCAAATGCAGAGGAGAGTAGCTGGGGGACGTACTGCCCTGGC
GAGTTCCCGAGCCCTCCACCGGAGTATGACACTTGCTTGGGAGACCTGTATAGTGTTGCTTGGATGGAAGACAGTGATTT
CCACAATCTGCGAACTGAATCTCTCAAGCAGCAATACAACTTGGTCAAGGATAGGACAGCGGTTCAGGATACATTCAGCT
ATGGCTCCCATGTGATGCAATATGGTTCATTGGAGTTGAATGTTAAGCATCTGTTTTCGTACATTGGCACAAACCCTGCT
AACGATGACAACACGTTTATAGAAGACAACTCGTTGCCATCGTTCTCAAAGGCTGTTAATCAGCGCGACGCTGACCTTGT
CTACTTCTGGCAGAAGTACCGGAAATTGGCAGACAGCTCACCTGAGAAAAATGAAGCTCGGAAGGAGTTGCTTGAAGTGA
TGGCCCACAGGTCTCATGTTGACAGCAGTGTTGAGCTCATTGGAAGCCTTCTCTTTGGCTCTGAGGACGGTCCAAGGGTT
CTGAAAGCCGTCCGTGCAGCTGGTGAGCCTCTGGTCGATGATTGGAGCTGTCTCAAGTCCACGGTTCGTACTTTTGAGGC
GCAATGTGGGTCGTTGGCGCAGTATGGGATGAAGCACATGCGGTCCTTCGCAAACATCTGCAACGCTGGCATCCTTCCTG
AAGCAGTGTCGAAGGTCGCTGCTCAGGCTTGCACCAGCATTCCTTCCAACCCCTGGAGTTCTATCCACAAGGGTTTTAGC
GCCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza longistaminata | KN538817.1_FG009 | ortholog_one2many | 1 retrogene | |
| Oryza brachyantha | OB01G29280 | ortholog_one2many | 1 retrogene | |
| Oryza barthii | OBART01G19640 | ortholog_one2many | 1 retrogene | |
| Oryza glumaepatula | OGLUM01G23260 | ortholog_one2many | 1 retrogene | |
| Oryza meridionalis | OMERI01G18100 | ortholog_one2many | 1 retrogene | |
| Oryza punctata | OPUNC01G20010 | ortholog_one2many | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0161200 | ortholog_one2many | 1 retrogene | |
| Oryza sativa japonica | OS01G0559600 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_zmay_6 | 66.75 | 86.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all GRMZM2G093032 retrocopies