Parental gene: | OGLUM01G33050 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza glumaepatula |
| Coordinates: | 1:32540091..32545006(+) |
>OGLUM01G33050
ATGGCCGCCTCCAGAAGCGAGCTTCTCCGGCCGGCATTCGGCGAGCCCTCTCCTTCGCTAGGACCATTCGTCGTTAACCC
TCACACCTGCAGCTACAGGTGGTGGCAGAAGTTCCTGATCGTGCTGGTGCTGTACACGGCGTGGGCGTCGCCGTTCGAGC
TGGCCATGGAGAAGTCGGCCTCGGCCGCGCTCGCCGTCACGGAGCTGGTGGTCGACGCCTTCTTCGCCGTCGACATTGCC
GTCTCCTTCTTCGTGGCGTACCGCGACGCCTCCACCGGCCTCCTCGTAACCGACCGCAAGAAGATCGCCACCAGACAAGC
ATTGTATGGGTTCCTCAATCTTCTCCGGCTCTGGCGACTACGGCGCGTCAGCAAGCTCTTTGCAAGGTTGGAGAAGGACA
TTAGGTTCAGTTACTTGTGGACCAGGCTTATCAAGCTCCTCTACGTGACGCTGTTCGCAGTGCACTTCGCCTCGTGCATC
TACCTGTGGATGGCGTTCCACCACAAGGCGAAGGAGCTGACGTGGATCGGCAGCCAGTTCCACGGCTTCGAGGACCGCAG
CGTGTGGTTCTGCTACACCTGCGCCGTGTACTGGTCCATCACCACGCTCGCCACCGTCGGCTACGGCGACCTGCACGCCG
CCAACACGGGCGAGATGCTGTTCAGCATCGCCTTCATGCTCTTCAACATGGGCCTCACCTCCTACATCATCGGCAACATC
ACCAACCTCGTCGTCCACGAAACCGCCAACACCTTCAAGATGAGGGACATGGTGCAGAGGACGTCGGTGTTCGGGAGAAC
GAACCGGCTGCCGGTGGCGATGAGGGAGCAGATGATGGAAAGCCTGCAGCTCAGGTTCAGGGCGGAGGAGCAGCTGCAGC
AGGAGATGCTGTCCGAGCTGCCCAAGGCCGTGCGGTCAGGCATCGCGCAGCACATGTTCAGGGGGGCGGTCGAGAGCTGC
TACCTGTTCCAGGGCGTCTCCGACAAGCTCGTCCTGCCGCTGGTCGCGGAGATGAAGGCAGAGTCATTTCCCCCCAAGGC
GGATATCATCCTGGAGAACGAGGCTTCGACGGACTGCTACATCATCGTGTCTGGTGAAGTGGAGGTATTGACAACCCTTG
AGGATGGTACAGAGAAGCAAGTGATGAGAATAGGGCCACGGGGAATGGCAGGGGAAATTGGGGTGATGTTCAACATCCCA
CAGCCGTTCACCATCCGGAGCAGAAAGCTCACGCAGCTCGTCCGTATAAGCCACAGCCATATGGTCCAGACCATCCGGCC
TAACACTGCAGATGGGGTCGTTGTATTCTCCAATTTTGTTCTGTTCACAATTTCTCACAACGTTTTTCAGTACCTTGAAT
CTCTGAAGGTGAAGGCAAAGGAAACAGCCTTTGTTAGGGATCATCTTCGCAATGGCTACTCCACGGTATTAGGAAGTGCA
ACCATGTTTGATGTAGATGAATCCAAAGAGTCAGCTCACAAAATGTTGCCATGCAAAGAACCCAAACGGGTATCTATTCA
TGAACACCTCTTAAATGGGACTGGCACAGCACTGAACGGCTCATCTGGGAAGCTCGTCATACTGCCAGATTCTATGCAAG
ATCTGATGAAACTTTCAGAAAAGAAGTTTGGGAAGGCAGCGAGAGGGATTCTCACCGTGGGAGGTGCCGAGGTAGAGGAC
ATTGAAGTGATAAGAGATGGCGATCACCTGTTCTTTAGTTGGTAG
ATGGCCGCCTCCAGAAGCGAGCTTCTCCGGCCGGCATTCGGCGAGCCCTCTCCTTCGCTAGGACCATTCGTCGTTAACCC
TCACACCTGCAGCTACAGGTGGTGGCAGAAGTTCCTGATCGTGCTGGTGCTGTACACGGCGTGGGCGTCGCCGTTCGAGC
TGGCCATGGAGAAGTCGGCCTCGGCCGCGCTCGCCGTCACGGAGCTGGTGGTCGACGCCTTCTTCGCCGTCGACATTGCC
GTCTCCTTCTTCGTGGCGTACCGCGACGCCTCCACCGGCCTCCTCGTAACCGACCGCAAGAAGATCGCCACCAGACAAGC
ATTGTATGGGTTCCTCAATCTTCTCCGGCTCTGGCGACTACGGCGCGTCAGCAAGCTCTTTGCAAGGTTGGAGAAGGACA
TTAGGTTCAGTTACTTGTGGACCAGGCTTATCAAGCTCCTCTACGTGACGCTGTTCGCAGTGCACTTCGCCTCGTGCATC
TACCTGTGGATGGCGTTCCACCACAAGGCGAAGGAGCTGACGTGGATCGGCAGCCAGTTCCACGGCTTCGAGGACCGCAG
CGTGTGGTTCTGCTACACCTGCGCCGTGTACTGGTCCATCACCACGCTCGCCACCGTCGGCTACGGCGACCTGCACGCCG
CCAACACGGGCGAGATGCTGTTCAGCATCGCCTTCATGCTCTTCAACATGGGCCTCACCTCCTACATCATCGGCAACATC
ACCAACCTCGTCGTCCACGAAACCGCCAACACCTTCAAGATGAGGGACATGGTGCAGAGGACGTCGGTGTTCGGGAGAAC
GAACCGGCTGCCGGTGGCGATGAGGGAGCAGATGATGGAAAGCCTGCAGCTCAGGTTCAGGGCGGAGGAGCAGCTGCAGC
AGGAGATGCTGTCCGAGCTGCCCAAGGCCGTGCGGTCAGGCATCGCGCAGCACATGTTCAGGGGGGCGGTCGAGAGCTGC
TACCTGTTCCAGGGCGTCTCCGACAAGCTCGTCCTGCCGCTGGTCGCGGAGATGAAGGCAGAGTCATTTCCCCCCAAGGC
GGATATCATCCTGGAGAACGAGGCTTCGACGGACTGCTACATCATCGTGTCTGGTGAAGTGGAGGTATTGACAACCCTTG
AGGATGGTACAGAGAAGCAAGTGATGAGAATAGGGCCACGGGGAATGGCAGGGGAAATTGGGGTGATGTTCAACATCCCA
CAGCCGTTCACCATCCGGAGCAGAAAGCTCACGCAGCTCGTCCGTATAAGCCACAGCCATATGGTCCAGACCATCCGGCC
TAACACTGCAGATGGGGTCGTTGTATTCTCCAATTTTGTTCTGTTCACAATTTCTCACAACGTTTTTCAGTACCTTGAAT
CTCTGAAGGTGAAGGCAAAGGAAACAGCCTTTGTTAGGGATCATCTTCGCAATGGCTACTCCACGGTATTAGGAAGTGCA
ACCATGTTTGATGTAGATGAATCCAAAGAGTCAGCTCACAAAATGTTGCCATGCAAAGAACCCAAACGGGTATCTATTCA
TGAACACCTCTTAAATGGGACTGGCACAGCACTGAACGGCTCATCTGGGAAGCTCGTCATACTGCCAGATTCTATGCAAG
ATCTGATGAAACTTTCAGAAAAGAAGTTTGGGAAGGCAGCGAGAGGGATTCTCACCGTGGGAGGTGCCGAGGTAGAGGAC
ATTGAAGTGATAAGAGATGGCGATCACCTGTTCTTTAGTTGGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA004342 | ortholog_one2one | 1 retrogene | |
| Oryza brachyantha | OB01G37960 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART01G29050 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA01G33130 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI01G32100 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0718700 | ortholog_one2one | 1 retrogene | |
| Setaria italica | Si003861m.g | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oglu_27 | 81.09 | 81.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OGLUM01G33050 retrocopies