Parental gene: | OB01G37960 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza brachyantha |
| Coordinates: | 1:22642647..22646094(+) |
>OB01G37960
ATGGCGAGGCAAAGCGGCGCTACAAGGGCGGCGATACTGCCGGTGACGAATGCCGGCATGGCCGCCGGAAGCGAGATTCT
CCGGCTGCCATCCGGCGAGGCCTCTCCTTCCCTAGGACGATTCGTCGTTAACCCTCACAGCTGCGGCTACTGGTGGTGGC
AGACGCTCCTGATCGTGCTGGTGCTGTACACGGCGTGGGCCTCGCCGTTCGAGCTGGCCATGGAGAAGTCGGACTGCGGT
GCGCTCGCCATCACGGAGCTGGTCGTCGACGCCTTCTTCGCCGTCGACATTGCCGCATCCTTCTTCGTGGCGTACCGCGA
CACCTCCACCGGCACCCTCGTGACTGACCGCAGGAAGATCGCCACAAGGCACCTGAAACGGCCGGGCTTCGCGATGGACG
TGGCCTCGACGATTCCTTTGCAGATGATCTACTGGATAGCGAGTGGCAAAAGACAAACACAGTATGGGTTCCTCAATCTT
CTCCGGCTTTGGCGACTACGGCGCGTCAGTAAGCTCTTTGCAAGGTTGGAGAAGGACATCAGATTCAATTACTTGTGGAC
CAGGCTTGTCAAGCTCCTCGGTGTGACGGTCTTCTCGCTGCACTTCGCCGCGTGCATCTACCTGTCGATGGCGTTCCACT
ACAGGGACAAGGAGCTCACGTGGATCGGCAGCCAGATCCACGGCTTCGAGGACCGCAGCGTGTGGTTCAACTACACCTGC
GCGGTGTACTGGGCCATGACCACGCTCGCCACCGTCGGCTACGGCGACCTGCACGCCGCCAACCCCGGCGAGATGCTGTT
CAGCATCGCCTTCATGCTCTTCAACATCGGCCTCACCTCCTACATCATCGGCAACATCACCATCCTCGTCGTCCATGGAA
CCACCAACACCTTCAAAATGAGGGACATGGTGCAGAGGGCGTCGGTGTTCGGAAGGATGAACGGCCTGCCGCGGGCGACG
AGGGAGCAGATGATGGAGAGCGTGCAGCTCAGGTTCAGGATGGAGGAGCGGCTGGAGCAGGAGATGCTGTCCGAGCTGCC
CAAGGCCGTGCGCTCTGGCATCGCGCTGCACATGTTCAGGGGGGCGGTCGAGAGCTGCTACCTGTTCCAAGGAGCCTCCA
GCAAGCTCGTCGTGCAGCTGGTCGCTGACATGAAGGCGGAGTTCTTCCCACCCAAGGCGGATATCATCCTGGAGAACGAG
GCTCCGACGGACTGCTATATCATTCTCTCCGGCGAAGTGGAGGCATTGACAACCCTCGAGGATGGCAGAGAGAAGCATGT
GATGACAATAGGGTCTCGGGGAATGGCAGGTGAAATCGGGGTGATGTTCAACACCCCACAGCCATTCACCATCCGGAGCA
GAACCCTCGCGCAGGTTGTCCGAATAAGTCACAGTCATATGGTTCAGACTGTTCGGCCTAACACCGCAGATGGGGTCATT
GTGTTCACCAATTTTGTTCAGTACCTTGAATCCCTGAAGGTGAAGGCAAATGAAGCAGCCTTTGTTAGGGATCATCTCCG
CAATGGCTGCACGACGGTGTTAGGAGGTGCAACCATGCTCAATGCAGATGAATCCAAAGGGAATGCTTACAGAATGTTGC
AATGCAAAGAACCCAAACGGGTTATTATCCATGAGCACCTCCCGGATGGGTCTGGCACAGCACCGAATGGTTCACCAGGG
AAGCTCGTCCTACTGCCAGATTCGTTCCAAGAACTGATGAAACTTTCAGAAAGGAAGTTTGGAAAGGCTGCGAGAGGGAT
CCTCACCGTGGATGGCGCCGAGGTAGATGACATTGAAGTGCTAAGAGATGGCGATCACTTGTTTTATAGTTGGTAG
ATGGCGAGGCAAAGCGGCGCTACAAGGGCGGCGATACTGCCGGTGACGAATGCCGGCATGGCCGCCGGAAGCGAGATTCT
CCGGCTGCCATCCGGCGAGGCCTCTCCTTCCCTAGGACGATTCGTCGTTAACCCTCACAGCTGCGGCTACTGGTGGTGGC
AGACGCTCCTGATCGTGCTGGTGCTGTACACGGCGTGGGCCTCGCCGTTCGAGCTGGCCATGGAGAAGTCGGACTGCGGT
GCGCTCGCCATCACGGAGCTGGTCGTCGACGCCTTCTTCGCCGTCGACATTGCCGCATCCTTCTTCGTGGCGTACCGCGA
CACCTCCACCGGCACCCTCGTGACTGACCGCAGGAAGATCGCCACAAGGCACCTGAAACGGCCGGGCTTCGCGATGGACG
TGGCCTCGACGATTCCTTTGCAGATGATCTACTGGATAGCGAGTGGCAAAAGACAAACACAGTATGGGTTCCTCAATCTT
CTCCGGCTTTGGCGACTACGGCGCGTCAGTAAGCTCTTTGCAAGGTTGGAGAAGGACATCAGATTCAATTACTTGTGGAC
CAGGCTTGTCAAGCTCCTCGGTGTGACGGTCTTCTCGCTGCACTTCGCCGCGTGCATCTACCTGTCGATGGCGTTCCACT
ACAGGGACAAGGAGCTCACGTGGATCGGCAGCCAGATCCACGGCTTCGAGGACCGCAGCGTGTGGTTCAACTACACCTGC
GCGGTGTACTGGGCCATGACCACGCTCGCCACCGTCGGCTACGGCGACCTGCACGCCGCCAACCCCGGCGAGATGCTGTT
CAGCATCGCCTTCATGCTCTTCAACATCGGCCTCACCTCCTACATCATCGGCAACATCACCATCCTCGTCGTCCATGGAA
CCACCAACACCTTCAAAATGAGGGACATGGTGCAGAGGGCGTCGGTGTTCGGAAGGATGAACGGCCTGCCGCGGGCGACG
AGGGAGCAGATGATGGAGAGCGTGCAGCTCAGGTTCAGGATGGAGGAGCGGCTGGAGCAGGAGATGCTGTCCGAGCTGCC
CAAGGCCGTGCGCTCTGGCATCGCGCTGCACATGTTCAGGGGGGCGGTCGAGAGCTGCTACCTGTTCCAAGGAGCCTCCA
GCAAGCTCGTCGTGCAGCTGGTCGCTGACATGAAGGCGGAGTTCTTCCCACCCAAGGCGGATATCATCCTGGAGAACGAG
GCTCCGACGGACTGCTATATCATTCTCTCCGGCGAAGTGGAGGCATTGACAACCCTCGAGGATGGCAGAGAGAAGCATGT
GATGACAATAGGGTCTCGGGGAATGGCAGGTGAAATCGGGGTGATGTTCAACACCCCACAGCCATTCACCATCCGGAGCA
GAACCCTCGCGCAGGTTGTCCGAATAAGTCACAGTCATATGGTTCAGACTGTTCGGCCTAACACCGCAGATGGGGTCATT
GTGTTCACCAATTTTGTTCAGTACCTTGAATCCCTGAAGGTGAAGGCAAATGAAGCAGCCTTTGTTAGGGATCATCTCCG
CAATGGCTGCACGACGGTGTTAGGAGGTGCAACCATGCTCAATGCAGATGAATCCAAAGGGAATGCTTACAGAATGTTGC
AATGCAAAGAACCCAAACGGGTTATTATCCATGAGCACCTCCCGGATGGGTCTGGCACAGCACCGAATGGTTCACCAGGG
AAGCTCGTCCTACTGCCAGATTCGTTCCAAGAACTGATGAAACTTTCAGAAAGGAAGTTTGGAAAGGCTGCGAGAGGGAT
CCTCACCGTGGATGGCGCCGAGGTAGATGACATTGAAGTGCTAAGAGATGGCGATCACTTGTTTTATAGTTGGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA004342 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART01G29050 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM01G33050 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA01G33130 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI01G32100 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0718700 | ortholog_one2one | 1 retrogene | |
| Setaria italica | Si003861m.g | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_obra_2 | 67.28 | 97.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OB01G37960 retrocopies