Parental gene:

OPN4 (2 of 3), ENSXMAG00000015929

Aliases:None
Description:opsin 4 [Source:HGNC Symbol;Acc:14449]
Organism:Platyfish (Xiphophorus maculatus)
Coordinates:JH556661.1:2698435..2727710(+)


>ENSXMAG00000015929
ATGGACTCCAGACTCCATATCGGACCGGTGGTTCCGACACCGGACCCGACCGGCAGCGCACCTTGGAATATCAGCTCCAT
CAACCCGCACCGGCTCATGGAGGTGTCTCCGGTGGCTCCAGCTAACCAGGACGCCATCGTCCCGGCCCACGCGTTTCCGA
CGGTAAACGTCCCCGCACACGCCCACTACACCATAGGCGTCGTCATCCTGGCTGTAGGAATCACAGGCATGCTGGGAAAC
TTCCTGGTCATTTACGCTTTCTGCAGAAGTCGGAGCCTTCGGACGCCGTCCAACATCTTCATAATCAACCTGGCAGTCAC
AGACTTCCTGATGTGTCTCACCCAGACACCCATCTTCTTCATCACCAGCATGCATAAACACTGGATCTTTGGGAAGAAAG
GGTGCGAACTGTACGCGTTCTGCGGCGCGCTGTTTGGCATCTGCAGCATGATGACACTGATGGTGATCGCAGTGGACCGA
TACGTTGTCATCACCCGGCCGCTGGCCTCTCTGGGAGTCATGTCTCACAGAAAAGCTCTCTGCTTCGTGGCCGCTGCCTG
GGTCTACTCCACGGGCTGGAGCCTTCCCCCGTTCTTCGGCTGGAGTGCCTACGTCCCTGAGGGTCTGATGACTTCCTGCT
CTTGGGACTACATGACCTTTACCCCTTCGGTGCGCTCCTACACCATGTTGCTCTTTACATTTGTTTTCTTCATTCCTCTC
TTCATCATCATCTTCTGCTACTGCGGCATCTTCAGAGCCATCCGCCACACAACACGAGCGATAACAAAGATCAACTGTGA
GGGAAGAAGAGACTCTGCAAAGAGGTTCCATAAAATGAGGAGTGAATGGAAAATGGCTAAAATCGCCTTAATCGTCATTT
TGCTGTTTGTCATCTCTTGGGCTCCGTACTCCTGTGCAGCCCTCACTGCATTTGCAGGGTACGCCGACTTACTGACTCCT
TACATGAATTCAGTTCCTGCTGTGATCGCCAAAGCTTCAGCCATTCACAACCCCATCATCTACGCCATCACGCATCCGAA
ATACAGATCGGCCATCAGCAGATACGTACCATATCTGGGCATGTTGCTGTGCATCAGCGGCAGGGACCGCTACAGCAGCA
GCAGCCTGCAGTCCACACGCCGATCCACGCTGACCAGCCAATCGGAGTGCAAAGGCACCGGCCGGCACCACACCTCGTCC
CAGTCTGAGAGCGAATCAGCGCACCTCTCGGACACCGAGGAGGACTGCTCGTCTCGGACGCCTGCCGGTCGTCTCTTGTC
CGCTGAGGTGCGCCATGCCAGCCAGAGATCGAAGGTGAGTGGTCACAGCGCAGGAGCGTCTGAGAGGACCGCTGCCCTCA
ACCCCACTGACCCGGCCATTTGTCACCTTTCACAGCTCACTACTCCGACAGAGCCTGAAGACATCTGCATGTTGGAGATC
AGCCGGCAGCCGACCAGCCACCTGCCTGCTACTCAGGATAGCATGAGGAGGGAGCCCGGACCAAAGACGGTGGCCAAGAA
CCCGTCGTCCATCATCGTCACCTCCATATCCACCCCGTCCATCCTGCACAGTCCTCCCGGTTTCCACGGCAGCCTCAAAG
TTGCCAAAACCGTCACTCCGGTTAGTAAGGAGCTGCTCGACATCGCCAGACTGGAGACGACGGCGTTACCGTGA

Species Parental gene accession Homology type Retrogenes number
Danio rerio ENSDARG00000022098 ortholog_many2many 1 retrogene
retro_drer_8,
Oreochromis niloticus ENSONIG00000015868 ortholog_one2one 1 retrogene
retro_onil_10,
Xiphophorus maculatus ENSXMAG00000017297 other_paralog 1 retrogene
retro_xmac_11,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_xmac_7 55.40 74.15
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Download FASTA sequences of all ENSXMAG00000015929 retrocopies