Parental gene: | OPN4 (1 of 3), ENSONIG00000015868 |
| Aliases: | None |
| Description: | opsin 4 [Source:HGNC Symbol;Acc:14449] |
| Organism: | Tilapia (Oreochromis niloticus) |
| Coordinates: | GL831148.1:621083..656823(+) |
>ENSONIG00000015868
ATGGATTCTAAGCTCCTAATTGGACCGGGGTTCCCGACACCGGACCCGACTTCCCGTGCACCCTGGAATATCACCTCCAT
CAGCCCTCGCCGGTCCCTGGAGCTTTCATCGATGGCTACAACTGGTTCCATGGTCAGAGACTACCCATTTCCAACCGTAG
ATGTCCCAGACCACGCTCACTACACTATTGGTGTTGTCATCTTTGCTGTAGGCATCACAGGCTTGCTGGGAAACTTCCTG
GTCATATATGCTTTTTGCAGGAGCCGAAGCCTGCGGACACCATCCAACATTTTCATTATTAATCTGGCAGTCACAGACTT
CCTCATGTGTCTCACGCAGACGCCCATCTTCTTCATTACCAGCATGCACAAACACTGGATCTTTGGGAAGAAAGGTTGTG
AGCTGTACGCCTTCTGTGGAGCTCTCTTCGGTATCTGCAGTATGATGACACTGATGGTGATTGCAGTGGACCGGTACGTG
GTGATCACCAGGCCTCTGGCTTCCCTCGGGGTGATGTCTCGTAAGAAAGCATTCACCACTGTGGCTGTTGCCTGGCTCTA
TTCAATGGGCTGGAGTTTGCCGCCCTTCTTTGGCTGGAGTGCCTACGTCCCGGAGGGTCTGATGACATCTTGTTCCTGGG
ACTACATGACGTTCACCCCTTCTGTCCGCTCCTACACCATGCTGCTCTTCACCTTTGTCTTCTTCATCCCTCTCTTTGTC
ATCATTTTCTGCTATTGCTGCATCTTCAGAGCCATTCGACACACAACGCGGGCGATAACAAAGATCAATTGCGAGGGGAC
CAGAGACTCTGCAAAGAGGTTCCATAAAATGAGGAGCGAATGGAGGATGGCTAAAATTGCACTCATCGTCATCCTGCTGT
TTGTCATCTCCTGGGCCCCTTATTCCTGCACAGCCCTCACTGCATTTGCTGGGTATGCAGACTTGTTAACTCCTTATATG
AACTCTGTTCCCGCTGTGATCGCCAAAGCATCAGCTATCCACAACCCCATCATATACGCCATAACACATCCTAAATACAG
GTCAGCAATCAGCAGGTACGTTCCTTACCTCGGGGTATTGCTGTGCATGAAGGGCAGAGACCGTTTCAGCAGCAGCAGCT
TCCAGTCCACCCGCCGATCAACCCTCACCAGCCAGTCAGAGTTCAAAGGCCCCAGCAGGACTCACAACTCTTCCCAGTCT
GAGAGTGAATCAGCCCAGTTCTCAGACACGGAGGAAGACTACTCTTCTCGAACTCCTGTTAGTCGTCACTTGTCCAGTGA
TGCCAAACAGGTGCGTCACGCTAGCCAGAGGTCAAAGGTGAGAGGGTATAACACAGAGTACGAGAGAACCTCTGCTCACA
ACGCCACTGATCCAGCCATATGTCACCTCTCACCAATCACTGCTCTGACAGAACCTGAAGGCATCTCCATGTCGGACATC
AGTCTGCAGCCAACCAGCAATCTGCCAGCTTCTCTGGACAATGTTATGAGGGAGTCAGGGCCAAGGACTGTGTGCAAGAC
CACATCGTCTGTCATCGTCACCTCCATATCCAGCCCGTCAATATTGCACAGTCCCCCAGGTTACCATGGCAACTTCAAAT
TGACCAAAAGTCACAGCCCAGTTGCCAAGGAGACCCTTGACATAGCCATGCTGGAGACAACAGCTTTACCATGA
ATGGATTCTAAGCTCCTAATTGGACCGGGGTTCCCGACACCGGACCCGACTTCCCGTGCACCCTGGAATATCACCTCCAT
CAGCCCTCGCCGGTCCCTGGAGCTTTCATCGATGGCTACAACTGGTTCCATGGTCAGAGACTACCCATTTCCAACCGTAG
ATGTCCCAGACCACGCTCACTACACTATTGGTGTTGTCATCTTTGCTGTAGGCATCACAGGCTTGCTGGGAAACTTCCTG
GTCATATATGCTTTTTGCAGGAGCCGAAGCCTGCGGACACCATCCAACATTTTCATTATTAATCTGGCAGTCACAGACTT
CCTCATGTGTCTCACGCAGACGCCCATCTTCTTCATTACCAGCATGCACAAACACTGGATCTTTGGGAAGAAAGGTTGTG
AGCTGTACGCCTTCTGTGGAGCTCTCTTCGGTATCTGCAGTATGATGACACTGATGGTGATTGCAGTGGACCGGTACGTG
GTGATCACCAGGCCTCTGGCTTCCCTCGGGGTGATGTCTCGTAAGAAAGCATTCACCACTGTGGCTGTTGCCTGGCTCTA
TTCAATGGGCTGGAGTTTGCCGCCCTTCTTTGGCTGGAGTGCCTACGTCCCGGAGGGTCTGATGACATCTTGTTCCTGGG
ACTACATGACGTTCACCCCTTCTGTCCGCTCCTACACCATGCTGCTCTTCACCTTTGTCTTCTTCATCCCTCTCTTTGTC
ATCATTTTCTGCTATTGCTGCATCTTCAGAGCCATTCGACACACAACGCGGGCGATAACAAAGATCAATTGCGAGGGGAC
CAGAGACTCTGCAAAGAGGTTCCATAAAATGAGGAGCGAATGGAGGATGGCTAAAATTGCACTCATCGTCATCCTGCTGT
TTGTCATCTCCTGGGCCCCTTATTCCTGCACAGCCCTCACTGCATTTGCTGGGTATGCAGACTTGTTAACTCCTTATATG
AACTCTGTTCCCGCTGTGATCGCCAAAGCATCAGCTATCCACAACCCCATCATATACGCCATAACACATCCTAAATACAG
GTCAGCAATCAGCAGGTACGTTCCTTACCTCGGGGTATTGCTGTGCATGAAGGGCAGAGACCGTTTCAGCAGCAGCAGCT
TCCAGTCCACCCGCCGATCAACCCTCACCAGCCAGTCAGAGTTCAAAGGCCCCAGCAGGACTCACAACTCTTCCCAGTCT
GAGAGTGAATCAGCCCAGTTCTCAGACACGGAGGAAGACTACTCTTCTCGAACTCCTGTTAGTCGTCACTTGTCCAGTGA
TGCCAAACAGGTGCGTCACGCTAGCCAGAGGTCAAAGGTGAGAGGGTATAACACAGAGTACGAGAGAACCTCTGCTCACA
ACGCCACTGATCCAGCCATATGTCACCTCTCACCAATCACTGCTCTGACAGAACCTGAAGGCATCTCCATGTCGGACATC
AGTCTGCAGCCAACCAGCAATCTGCCAGCTTCTCTGGACAATGTTATGAGGGAGTCAGGGCCAAGGACTGTGTGCAAGAC
CACATCGTCTGTCATCGTCACCTCCATATCCAGCCCGTCAATATTGCACAGTCCCCCAGGTTACCATGGCAACTTCAAAT
TGACCAAAAGTCACAGCCCAGTTGCCAAGGAGACCCTTGACATAGCCATGCTGGAGACAACAGCTTTACCATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Danio rerio | ENSDARG00000022098 | ortholog_many2many | 1 retrogene | |
| Oreochromis niloticus | ENSONIG00000017219 | other_paralog | 1 retrogene | |
| Xiphophorus maculatus | ENSXMAG00000015929 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_onil_10 | 60.80 | 66.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSONIG00000015868 retrocopies