Parental gene:

adh5, ENSXETG00000009304

Aliases:None
Description:alcohol dehydrogenase 5 (class III), chi polypeptide [Source:Jamboree;Acc:XB-GENE-977214]
Organism:Xenopus (Xenopus tropicalis)
Coordinates:GL172747.1:2507501..2533659(+)


>ENSXETG00000009304
CATTGTGCACCAGGAAACACATTATCCATAACAAAAGTCCTTATGTTTATTTTGCAGGTTATAAAGTGCAAGGCAGCTGT
AGCCTGGGAAGCTGGCAAGCCTTTTTCTATAGAGGAAATTGAAGTTGCTCCTCCTAGGGATCATGAAGTCCGTGTAAAGA
TTGTTGCCACAGGAGTCTGCCGAACTGATGCACATGCTGTGAGCACTCATTTCAAAGAAGGGCTGTTCCCAGTGATTCTT
GGCCATGAAGGTGCTGGTATTGTGGAAAGTGTTGGCCCAGGTGTCACCAGAGTGAAACCAGGCGATAAAGTTATTCCTCT
TTATATTCCACAATGCGGTGAATGCAAGTTCTGTCTGAATCCCAAAACCAACTTGTGTGAAAAGATAAGTAAAATTAAGA
CTGCCATTTCGGATCAAGACCTGATGGCAGACAACACAAGCAGGTTTACCTGCAAGGGGAAGCAGATATATCATTTTATG
GGCACCAGCACCTTTTCAGAATACACTGTGTGTGCTGAAACCTCAGTTGCTAAAATTGATGATGCGGCTCCTCTGGAGAA
AGTCTGCCTGATCGGTTGTGGTTTCTCCACTGGTTATGGTGCTGCCATCAACACTGCTAAGGTTGAGCCTGGCTCCTCCT
GTGCAGTTTTTGGCTTAGGAGGTGTTGGGCTCTCAGCTGTCATGGGATGTAAAGCTGCAGGTGCAAGTCGAATTATTGGC
ATTGACATCAACAGTGATAAATTCGAGAAAGCTCTAGAGCTGGGAGCCACCGAATGCATCAACCCTAAAGATTATGACAA
GCCAATTCAACAGGTCATATCGGAAATGACTGGTGGTGGCGTTGATTTCTCCATTGAATGCATTGGAATTATTGATGTGA
TGGGAAAAATCCTCAAAAAACATGATAAAATGCAAAAACACTTAAATAGACATGTCCGTAAATGGAGATGCATAACTATG
GTTGCATATTTTTCTCATAAGCAGGGACAGGTTGCTCCCTGGGATACATTTCTCAGCTTGCAATCTAAAAAAATCCAGGG
CATATATTTAAATACTATGGAGTTCAGACCAGTCTTAAGTCTAACCCTGCAGTCTCCTAAGTTGTCAAATGTGCCCCGTG
TTGGTCCATATGGTTCCATGTCTTTGGGTAGAAAGACAAGCTGGAAAAGTGTGGACAATGTTCCAAAGCTGGTGGAAGAT
TATTTGGGGAATAAATTTGATCTGGATTCTTTAGTAACATTTACTCTGCCATTTGATAAAATAAATGAAGCTTTTGATTT
AATGCGTGATGGGAAAAGGTGGGAATCTCCTATCCCGCCACCCAAACGTACCCCAAGGGCACACATAAAAACTCACAAGG
GCAACAGGGCCCCCCCGGGAGTGTGTTTGGCCATGGCGGGGCCCCTTGGTGGGGGCAGGTGGACAAAGTTTGTGCCTTTA
GCCTTAATTCTCCCCAGTCCAGCAGATGGGAATTTACAGGTCGTCAAATGTAAAGCTGCTGTAGCATGGGAGGCAGGAAA
ACCCCTCTCAATTGAAGAAGTTGAAGTGGCTCCCCCAAAAGCTCATGAAGTTCGCATTAAGATAGTCTCCACTGCTGTGT
GCCATACAGATGCCTACACATTGAGTGGTGCTGATCCAGAAGGATGTTTCCCTGTAATATTGGGTCATGAAGGAGCTGGC
ATTGTGGAAAGTGTAGGAGAAGGTGTTACCAGAGTAAAACCAGGTGACAAAGTAATACCCTTGTATATCCCACAGTGTGG
TGAATGCAAGTTCTGTTTGAATCCCAAAACAAACCTGTGCCAGAAGATAAGGATTACTCAAGGCAAGGGGTTTATGCCTG
ATGGCAGCAGTAGGTTCACTTGCAAAGGACAACAGATTTTCCACTTCATGGGCACCAGCACTTTCTCTGAATACACTGTT
GTAGCAGATATCTCCGTTGCTAAAATAGATGACTCTGCTCCTCTGGACAAAGTCTGCTTGCTGGGCTGTGGAATCTCAAC
TGGTTATGGAGCTGTCATTAACACAGCAAAGGTTGAACCTGGCTCTACATGTGCTGTCTTTGGCTTAGGAGGGGTTGGTC
TTGCAGTCATTATGGGCTGTAAAGTAGCCGGAGCTACTCGCATTATTGGCATTGACCTTAACAAGGACAAGTTTGTAAAG
GCAACAGAGTTTGGAGCTACAGATTGTTTAAACCCAGCAGACTTCAAAAAACCTATTCAGGATGTGCTGATTGAAATGAC
TGATGGAGGAGTCGACTATTCCTTTGAGTGTATTGGCAATGACATTAAAGCCGTGAGTGCTTTCTATTTGTGCTGGATGG
ATTCTTTGAGAGCTGCCCTGGAAGCGTGTCACAAAGGCTGGGGTACAAGTGTTATAGTTGGTGTGGCAGCGTCTGGCCAG
GAGATTGCTACACGCCCATTTCAACTTGTCACAGGGAGGGTTTGGAAAGGAACTGCATTTGGAGGATGGAAGAGTGTGGA
CAGTGTGCCAAAGCTGGTTTCTGAATATATGGCAAAAAAGATTAAGGTTGATGAGTTTGTGACTCACACTTTACCCTTTA
ATTCTATCAATGAAGCATTTGAACTCATGCATGCAGGGAAGAGCATTCGTGGTGTTTTGAATTATTAA

Library Parental gene expression (RPM)
SRP007412_brain 21 .05 RPM
SRP007412_skeletal_muscle 20 .53 RPM
SRP007412_heart 41 .14 RPM
SRP007412_kidney 41 .14 RPM
SRP007412_liver 21 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013007 ortholog_one2many 1 retrogene
retro_cfam_14,
Callithrix jacchus ENSCJAG00000007198 ortholog_one2one 2 retrogenes
retro_cjac_1029, retro_cjac_2933,
Homo sapiens ENSG00000197894 ortholog_one2one 3 retrogenes
retro_hsap_175, retro_hsap_330, retro_hsap_3607,
Gorilla gorilla ENSGGOG00000028244 ortholog_one2many 2 retrogenes
retro_ggor_2434, retro_ggor_354,
Myotis lucifugus ENSMLUG00000002722 ortholog_one2one 1 retrogene
retro_mluc_1702,
Macaca mulatta ENSMMUG00000003552 ortholog_one2many 1 retrogene
retro_mmul_299,
Mustela putorius furo ENSMPUG00000009642 ortholog_one2one 1 retrogene
retro_mputfur_1625,
Nomascus leucogenys ENSNLEG00000013946 ortholog_one2one 3 retrogenes
retro_nleu_1772, retro_nleu_2636, retro_nleu_983,
Pongo abelii ENSPPYG00000014946 ortholog_one2many 3 retrogenes
retro_pabe_176, retro_pabe_359, retro_pabe_453,
Pan troglodytes ENSPTRG00000016303 ortholog_one2one 3 retrogenes
retro_ptro_166, retro_ptro_2438, retro_ptro_266,
Sus scrofa ENSSSCG00000009185 ortholog_one2one 1 retrogene
retro_sscr_659,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_xtro_57 63.96 98.14
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Download FASTA sequences of all ENSXETG00000009304 retrocopies