Parental gene: | MMU.2546, ENSMMUG00000003552 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 5:91979858..91998487(-) |
>ENSMMUG00000003552
CCACTTCAGGTTATCAAGTGCAAGGCTGCAGTTGCTTGGGAGGCTGGAAAGCCTCTCTCCATAGAGGAGATAGAGGTGGC
ACCCCCAAAGGCTCATGAAGTTCGAATCAAGATCATTGCCACTGCAGTTTGCCACACCGATGCCTATACCCTGAGTGGAG
CTGATCCTGAGGGTTGTTTTCCAGTGATCTTGGGACATGAAGGTGCTGGAGTTGTGGAAAGTGTTGGCGAGGGAGTTACT
AAACTGAAGGCGGGTGACACTGTCATCCCACTTTACATCCCACAGTGTGGAGAATGCAAATTTTGTCTAAATCCTAAAAC
TAACCTTTGCCAGAAGATAAGAGTCACTCAAGGGAAAGGATTAATGCCAGATGGTACCAGCAGATTTACTTGCAAAGGAA
AGACAATTTTGCATTACATGGGAACCAGCACATTTTCTGAATACACAGTTGTGGCTGATATCTCTGTTGCTAAAATAGAT
CCTTTAGCACCTTTGGATAAAGTCTGCCTTCTAGGTTGTGGCATTTCAACTGGTTATGGTGCTGCTGTGAACACTGCCAA
GGTGGAGCCTGGCTCTGTTTGTGCAGTCTTTGGCCTGGGAGGAGTTGGATTGGCAGTTATCATGGGCTGTAAAGTGGCTG
GTGCATCCCGGATCATTGGCGTGGACATCAATAAAGATAAATTTGCAAGGGCCAAAGAGTTTGGAGCCACTGAATGTATT
AACCCTCAGGATTTTAGTAAACCCATCCAGGAAGTGCTCATTGAGATGACTGATGGAGGAGTGGACTATTCCTTTGAATG
TATTGGTAATGTGAAGGTCATGAGAGCAGCGCTTGAGGCGTGTCACAAGGGCTGGGGCGTCAGCGTGGTGGTTGGAGTAG
CTGCTTCAGGTGAAGAAATTGCCACTCGTCCATTCCAGCTGGTAACAGGTCGCACATGGAAAGGCACTGCCTTTGGAGGA
TGGAAGAGTGTTGAAAGTGTCCCAAAGTTGGTGTCTGAATATATGTCCAAAAAGATAAAAGTTGATGAATTTGTGACTCA
CAATCTGTCTTTTGATGAAATTAACAAAGCCTTTGAACTGATGCATTCTGGAAAGAGCATTCGAACTGTTGTAAAGATTT
AA
CCACTTCAGGTTATCAAGTGCAAGGCTGCAGTTGCTTGGGAGGCTGGAAAGCCTCTCTCCATAGAGGAGATAGAGGTGGC
ACCCCCAAAGGCTCATGAAGTTCGAATCAAGATCATTGCCACTGCAGTTTGCCACACCGATGCCTATACCCTGAGTGGAG
CTGATCCTGAGGGTTGTTTTCCAGTGATCTTGGGACATGAAGGTGCTGGAGTTGTGGAAAGTGTTGGCGAGGGAGTTACT
AAACTGAAGGCGGGTGACACTGTCATCCCACTTTACATCCCACAGTGTGGAGAATGCAAATTTTGTCTAAATCCTAAAAC
TAACCTTTGCCAGAAGATAAGAGTCACTCAAGGGAAAGGATTAATGCCAGATGGTACCAGCAGATTTACTTGCAAAGGAA
AGACAATTTTGCATTACATGGGAACCAGCACATTTTCTGAATACACAGTTGTGGCTGATATCTCTGTTGCTAAAATAGAT
CCTTTAGCACCTTTGGATAAAGTCTGCCTTCTAGGTTGTGGCATTTCAACTGGTTATGGTGCTGCTGTGAACACTGCCAA
GGTGGAGCCTGGCTCTGTTTGTGCAGTCTTTGGCCTGGGAGGAGTTGGATTGGCAGTTATCATGGGCTGTAAAGTGGCTG
GTGCATCCCGGATCATTGGCGTGGACATCAATAAAGATAAATTTGCAAGGGCCAAAGAGTTTGGAGCCACTGAATGTATT
AACCCTCAGGATTTTAGTAAACCCATCCAGGAAGTGCTCATTGAGATGACTGATGGAGGAGTGGACTATTCCTTTGAATG
TATTGGTAATGTGAAGGTCATGAGAGCAGCGCTTGAGGCGTGTCACAAGGGCTGGGGCGTCAGCGTGGTGGTTGGAGTAG
CTGCTTCAGGTGAAGAAATTGCCACTCGTCCATTCCAGCTGGTAACAGGTCGCACATGGAAAGGCACTGCCTTTGGAGGA
TGGAAGAGTGTTGAAAGTGTCCCAAAGTTGGTGTCTGAATATATGTCCAAAAAGATAAAAGTTGATGAATTTGTGACTCA
CAATCTGTCTTTTGATGAAATTAACAAAGCCTTTGAACTGATGCATTCTGGAAAGAGCATTCGAACTGTTGTAAAGATTT
AA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 36 .17 RPM |
| SRP007412_brain | 20 .84 RPM |
| SRP007412_cerebellum | 19 .63 RPM |
| SRP007412_heart | 47 .34 RPM |
| SRP007412_kidney | 67 .60 RPM |
| SRP007412_liver | 132 .65 RPM |
| SRP007412_testis | 16 .47 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000013007 | ortholog_many2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000007198 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000197894 | ortholog_one2many | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028244 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000002722 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000009642 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013946 | ortholog_one2many | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000014946 | ortholog_many2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000016303 | ortholog_one2many | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000009185 | ortholog_one2many | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000009304 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_299 | 98.38 | 99.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000003552 retrocopies