Parental gene: | taldo1, ENSXETG00000001671 |
| Aliases: | None |
| Description: | transaldolase 1 [Source:Jamboree;Acc:XB-GENE-1005380] |
| Organism: | Xenopus (Xenopus tropicalis) |
| Coordinates: | GL172932.1:944767..959892(+) |
>ENSXETG00000001671
ATGCCAAACACCCCTGTCAAGAAGCAGAAAATGGAGGAATCATCGGCACTGGATCAACTGAAGCAGCACACTGTGGTGGT
GGCCGATACTGGCGATTTTAATGCTATTGAAGTATACAAGCCCCAGGATGCAACCACTAACCCATCGCTGATACTGGCAG
CTGCACAAATGCCTGACTACCAGGGCCTGGTGAAAGATGCCATTCAGTACGGAAGAAATCTCGGAGGGTCAGAAGAAGAG
CAGATCAATAATATCATGGACAAGCTTTTCGTCCTGTTTGGAGTGGAAATCCTTAAGAAAATACCCGGTCGAGTTTCAAC
AGAGGTGGATGCCCGGCTATCTTTCGATAAAGATGGAATGGTGAAGCGTGCAAAGCGCCTTATAGCTCTCTACAAGGAAG
CTGGAATTGATAAAGAGAGGATCCTGATCAAGCTTTCTTCAACATGGGAGGGAATCCAAGCTGGCAAGATTCTTGAGGAA
GAATATGGCATTCACTGCAACATGACCCTGCTGTTCTCCTTTGCCCAGGCAGTGGCATGTGCTGAGGCTGGCGTTACACT
CATTTCTCCATTCGTGGGTAGGATATTGGACTGGCATGTAGCAAACTCTGATAAGAAGAGCTACGAGCCTTCAGAAGACC
CAGGTATTAAAGNCGTTGCCAAAATCTACAACTACTACAAAAAATTTGGCTACAAAACCATTGTGATGGGGGCATCCTTT
AGGAACACCGGCGAAATCAAAGCTCTGACTGGATGTGATTATCTCACCATCTCCCCCAAACTGCTCGGTGAGCTGGCCAA
AGACAGCAGCAAACTCACCCCAGTGCTTACAGTCAAAGAGGCCCAGGCAAGTAACCTAGAGAAAGTGCACTTGGAGGAAA
AAGATTTCCGGTGGCTGCATAACGAAGACCAAATGGCAGTGGAGAAACTGTCCGATGGGATCAGGAAATTTGCCATTGAT
GCTGTTAAGTTGGAGAAGATGTTAAAGGAACGCCTCTGCAGTGCAGAAAATGGGAAATAA
ATGCCAAACACCCCTGTCAAGAAGCAGAAAATGGAGGAATCATCGGCACTGGATCAACTGAAGCAGCACACTGTGGTGGT
GGCCGATACTGGCGATTTTAATGCTATTGAAGTATACAAGCCCCAGGATGCAACCACTAACCCATCGCTGATACTGGCAG
CTGCACAAATGCCTGACTACCAGGGCCTGGTGAAAGATGCCATTCAGTACGGAAGAAATCTCGGAGGGTCAGAAGAAGAG
CAGATCAATAATATCATGGACAAGCTTTTCGTCCTGTTTGGAGTGGAAATCCTTAAGAAAATACCCGGTCGAGTTTCAAC
AGAGGTGGATGCCCGGCTATCTTTCGATAAAGATGGAATGGTGAAGCGTGCAAAGCGCCTTATAGCTCTCTACAAGGAAG
CTGGAATTGATAAAGAGAGGATCCTGATCAAGCTTTCTTCAACATGGGAGGGAATCCAAGCTGGCAAGATTCTTGAGGAA
GAATATGGCATTCACTGCAACATGACCCTGCTGTTCTCCTTTGCCCAGGCAGTGGCATGTGCTGAGGCTGGCGTTACACT
CATTTCTCCATTCGTGGGTAGGATATTGGACTGGCATGTAGCAAACTCTGATAAGAAGAGCTACGAGCCTTCAGAAGACC
CAGGTATTAAAGNCGTTGCCAAAATCTACAACTACTACAAAAAATTTGGCTACAAAACCATTGTGATGGGGGCATCCTTT
AGGAACACCGGCGAAATCAAAGCTCTGACTGGATGTGATTATCTCACCATCTCCCCCAAACTGCTCGGTGAGCTGGCCAA
AGACAGCAGCAAACTCACCCCAGTGCTTACAGTCAAAGAGGCCCAGGCAAGTAACCTAGAGAAAGTGCACTTGGAGGAAA
AAGATTTCCGGTGGCTGCATAACGAAGACCAAATGGCAGTGGAGAAACTGTCCGATGGGATCAGGAAATTTGCCATTGAT
GCTGTTAAGTTGGAGAAGATGTTAAAGGAACGCCTCTGCAGTGCAGAAAATGGGAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 48 .74 RPM |
| SRP007412_skeletal_muscle | 5 .42 RPM |
| SRP007412_heart | 82 .35 RPM |
| SRP007412_kidney | 82 .35 RPM |
| SRP007412_liver | 214 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000010336 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000000841 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000025503 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018367 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_xtro_16 | 59.02 | 53.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSXETG00000001671 retrocopies