Parental gene: | UBAP1, ENSTSYG00000013035 |
| Aliases: | None |
| Description: | ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:12461] |
| Organism: | Tarsier (Tarsius syrichta) |
| Coordinates: | GeneScaffold_5988:6289..16181(+) |
>ENSTSYG00000013035
TATGACTTCTCGTTGGAAAAGAAAACCATTGAGTGGGCCGAAGATATTAAGAAAATCCAAGAAGCCCAGAGGGAAGCTGA
GCGCAAGACCGAGGAAGCAGAGGCTAAAGCGAAGTCTAAGAGTGGTCCAGAGGGCGATAGCAAAGTGAGCTTCTCTAAGA
CTCACAGTACAGCCACAATGCCACCTCCTATTAACCCCATCCTTGCCAGCTTACAGCACAACAGCATTCTTACCCCGACT
CGAGTCAGCAGCAGTGCCACGAAACAGAAAGTTCTCAGCCCACCCCACACAAAGGCAGATTTCAATCCTGCTGACTTTGA
GTGTGAAGAGGACCCATTTGATAATCTGGAGTTAAAAACTATTGATGAGAAGGAAGAGTTGAGAAACATTCTGGTAGGAA
CCACTGGACCCATTATGGCTCAGTTATTGGACAGTAACTTGCCCAGGGGAGGCTCTGGGTCTGTGTTACAGGATGAGGAG
GTCCTGGCATCCTTGGAGCGGGCAACCCTAGATTTCAAGCCTCTTCATAAACCCAATGGCTTTATAACCTTACCACAGTT
GGGCAACTGTGAAAAGATGTCACTGTCTTCCAAAGTGTCCCTCCCCCCTATCCCTGCAGTAAGCAATATCAAATCCCTAT
CCTTCCCCAAACTTGACTCTGATGACAGCAATCAGAAGACAGCCAAGCTGGCGAGCACTTTCCATAGCACATCCTGCCTC
CGCAATGGCACGTTCCAGAATTCCCTAAAGCCTTTCACCCAAAGCAGTGCCAGTGACCTCAATGCACATTGTACTCTTGG
GCTTTCAGCTTTGAACTTAGACAATGGCACAGAGATGCCAACTCTGGCATCTTCACTGATGCCATCCCTCTCTGTTTTGT
CTGTGTGCACAGAGGAATCACTTCCAAATGTCACCCCTCCTAATTTCGCAATGTCACAAGTGCCCAACATGCCCAGCTGT
CCCCAGGCCTATCCTGAACTGCAGACGCTGTCCCCCAGTGAGCGGCAGTGTGTGGAGACAGTAGTCAACATGGGGTACTC
GTATGAGTGTGTCCTGAGAGCCATGAAGAAGAAAGGGGAGAATATTGAGCAGATTCTCGACTATCTCTTTGCACATGGAC
AGCTTTGTGAGAAGGGCTTTGACCCCCTTTTAGTGGAAGAGGCCCTGGAAATGCACCAGTGTTCAGAAGAAAAG
TATGACTTCTCGTTGGAAAAGAAAACCATTGAGTGGGCCGAAGATATTAAGAAAATCCAAGAAGCCCAGAGGGAAGCTGA
GCGCAAGACCGAGGAAGCAGAGGCTAAAGCGAAGTCTAAGAGTGGTCCAGAGGGCGATAGCAAAGTGAGCTTCTCTAAGA
CTCACAGTACAGCCACAATGCCACCTCCTATTAACCCCATCCTTGCCAGCTTACAGCACAACAGCATTCTTACCCCGACT
CGAGTCAGCAGCAGTGCCACGAAACAGAAAGTTCTCAGCCCACCCCACACAAAGGCAGATTTCAATCCTGCTGACTTTGA
GTGTGAAGAGGACCCATTTGATAATCTGGAGTTAAAAACTATTGATGAGAAGGAAGAGTTGAGAAACATTCTGGTAGGAA
CCACTGGACCCATTATGGCTCAGTTATTGGACAGTAACTTGCCCAGGGGAGGCTCTGGGTCTGTGTTACAGGATGAGGAG
GTCCTGGCATCCTTGGAGCGGGCAACCCTAGATTTCAAGCCTCTTCATAAACCCAATGGCTTTATAACCTTACCACAGTT
GGGCAACTGTGAAAAGATGTCACTGTCTTCCAAAGTGTCCCTCCCCCCTATCCCTGCAGTAAGCAATATCAAATCCCTAT
CCTTCCCCAAACTTGACTCTGATGACAGCAATCAGAAGACAGCCAAGCTGGCGAGCACTTTCCATAGCACATCCTGCCTC
CGCAATGGCACGTTCCAGAATTCCCTAAAGCCTTTCACCCAAAGCAGTGCCAGTGACCTCAATGCACATTGTACTCTTGG
GCTTTCAGCTTTGAACTTAGACAATGGCACAGAGATGCCAACTCTGGCATCTTCACTGATGCCATCCCTCTCTGTTTTGT
CTGTGTGCACAGAGGAATCACTTCCAAATGTCACCCCTCCTAATTTCGCAATGTCACAAGTGCCCAACATGCCCAGCTGT
CCCCAGGCCTATCCTGAACTGCAGACGCTGTCCCCCAGTGAGCGGCAGTGTGTGGAGACAGTAGTCAACATGGGGTACTC
GTATGAGTGTGTCCTGAGAGCCATGAAGAAGAAAGGGGAGAATATTGAGCAGATTCTCGACTATCTCTTTGCACATGGAC
AGCTTTGTGAGAAGGGCTTTGACCCCCTTTTAGTGGAAGAGGCCCTGGAAATGCACCAGTGTTCAGAAGAAAAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000011672 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000013063 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015802 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000009100 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000028294 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tsyr_846 | 75.28 | 65.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tsyr_1908 | 81.75 | 64.57 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTSYG00000013035 retrocopies