Parental gene:

UBAP1, ENSSTOG00000028294

Aliases:None
Description:ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:12461]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393334.1:2343355..2372732(+)


>ENSSTOG00000028294
ATGGCTTCTAAGAAGTTGGGTGCAGATTTTCATGGGACTTTCAGTTACCTTGATGATGTCCCATTTAAGATAGGAGACAA
ATTCAAAACACCAGCTAAAGTTGGTCTACCTATTGGCTTCTCCTTGCCTGATTGTTTGCAGGTTGTCAGAGAAGTACAGT
ATGACTTCTCCTTGGAAAAGAAAACCATTGAGTGGGCTGAAGATATTAAGAAAATCCAAGAAGCCCAACAGGAAGCAGAA
CGCAAAGCCGAGGAAGCAGAAGCTAAAGTGAATTCTAAGAGTGGCCCAGAGGGTGATAGCAAAACGAGTTTCTCCAAGAC
TCACAGTACAGCCACAATGCCACCTCCAATTAACCCTATCCTTGCCAGCTTACAGCACAACAGCATCCTCACTCCAACTC
GGGTCAGCAGTAGTGCCACGAAACAGAAAGTTCTCAGCCCACCCCACACAAAGGCAGACTTCAATCCTGCTGATTTTGAG
TGTGAAGAAGACCCATTTGATAATCTGGAGTTGAAAACCATTGATGAGAAGGAGGAGCTGAGAAATATTCTGGTAGGGAC
CACTGGACCCATTATGGCTCAGTTACTGGACAATAACTTGCCCAGAGGAGGCTCTGGATCTGTATTACAGGATGAGGAGG
TCTTGGCATCCTTGGAGCGGGCAACCCTAGATTTCAAGCCTCTTCATAAACCCAATGGCTTTATAACCTTACCACAGTTG
GGCAACTGTGAAAAGATGTCGCTGTCTTCCAAAGTGTCCCTGCCCCCTATCCCTGCAGTAAGCAATATCAAATCTCTGTC
CTTCCCGAAACTTGACTCTGATGACAGCAATCAGAAGACAGTCAAGCTGGCAAGCACTTTCCATAGCACATCCTGCCTCC
GCAGTGGCATGTTCCGGAATTCCCTAAAGCCTTCCACCCAAAGCAGTGCCAGTGAGCTCAATGGGGACCATACTCTTGGG
CTTTCAGCTTTGAACTTGGACAGTGGTACAGAGGTGCCAACCCTGACATCCTCTCAGATGCCTTCCCTGTCTGTCTTGTC
TGTGTGCACAGAAGAATCATCACCTCCAAATACAGGTCCCACAGTTACCCCTCCAAATTTCTCAGTGTCACAAGTGCCCA
ACATGCCCAGCTGTCCCCAGGTCTATTCTGAACTGCAAACACTGTCTCCCAGTGAGCGGCAGTGTGTGGAGACAGTGGTT
AACATGGGCTACTCCTATGAGCGTGTCCTGAGAGCCATGAAGAAGAAGGGAGAGAATATCGAGCAGATTCTCGACTATCT
CTTTGCACATGGACAGCTTTGTGAGAAGGGCTTCGACCCTCTTTTAGTGGAAGAGGCTCTGGAAATGCACCAGTGTTCAG
AAGAAAAGATGATGGAGTTTCTTCAGTTAATGAGCAAATTTAAGGAAATGGGCTTTGAACTGAAAGACATTAAGGAAGTT
TTGCTATTACACAACAATGACCAGGACAATGCTTTGGAAGACCTCATGGCTCGGGCTGGAGCCAGCTGA

Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000011672 ortholog_one2one 1 retrogene
retro_eeur_466,
Myotis lucifugus ENSMLUG00000013063 ortholog_one2one 1 retrogene
retro_mluc_2305,
Otolemur garnettii ENSOGAG00000015802 ortholog_one2one 1 retrogene
retro_ogar_557,
Ochotona princeps ENSOPRG00000009100 ortholog_one2one 3 retrogenes
retro_opri_355, retro_opri_477, retro_opri_680,
Tarsius syrichta ENSTSYG00000013035 ortholog_one2one 2 retrogenes
retro_tsyr_1908, retro_tsyr_846,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1318 67.03 72.91
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Download FASTA sequences of all ENSSTOG00000028294 retrocopies