Parental gene:

RPS25, ENSTSYG00000005422

Aliases:None
Description:ribosomal protein S25 [Source:HGNC Symbol;Acc:10413]
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_7564:7205..9028(-)


>ENSTSYG00000005422
ATGCCGCCCAAGGATGACAAGAAGAAGAAAGATGCCGGAAAGTCGGCCAAGAAAGACAAAGACCCAGTGAACAAATCTGG
GGGCAAGGCTAAAAAGAAGAAGTGGTCTAAAGGCAAAGTTCGGGACAAGCTTAATAACCTAGTCTTGTTTGACAAAGCCA
CGTATGACAAACTCTGTAAGGAAGTTCCCAATTATAAGCTTATAACTCCAGCTGTGGTCTCTGAGAGACTGAAGATTCGC
GGTTCTCTGGCCAGGGCAGCCCTTCAGGAGCTCCTTAGTAAAGGTCTTATCAAACTGGTTTCAAAGCACAGAGCTCAAGT
AATTTACACTAGAAATACCAAGGGTGGAGATGCCCCAGCTGCTGGTGAAGATGCATGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000027772 possible_ortholog 2 retrogenes
retro_btau_203, retro_btau_9,
Callithrix jacchus ENSCJAG00000013691 ortholog_one2many 1 retrogene
retro_cjac_208,
Dasypus novemcinctus ENSDNOG00000007880 ortholog_one2one 7 retrogenes
retro_dnov_1092, retro_dnov_1566, retro_dnov_2219, retro_dnov_2593, retro_dnov_346, retro_dnov_877, retro_dnov_973,
Homo sapiens ENSG00000118181 ortholog_one2one 3 retrogenes
retro_hsap_3371, retro_hsap_3547, retro_hsap_4310,
Gorilla gorilla ENSGGOG00000025540 ortholog_one2one 7 retrogenes
retro_ggor_1601, retro_ggor_1666, retro_ggor_1979, retro_ggor_2395, retro_ggor_2880, retro_ggor_337, retro_ggor_634,
Mus musculus ENSMUSG00000009927 possible_ortholog 15 retrogenes
retro_mmus_128, retro_mmus_1368, retro_mmus_1455, retro_mmus_1760, retro_mmus_1769, retro_mmus_1788, retro_mmus_2375, retro_mmus_2393, retro_mmus_2641, retro_mmus_2700, retro_mmus_2797, retro_mmus_3218, retro_mmus_336, retro_mmus_3523, retro_mmus_880,
Oryctolagus cuniculus ENSOCUG00000017256 ortholog_one2one 11 retrogenes
retro_ocun_1166, retro_ocun_1231, retro_ocun_1319, retro_ocun_1553, retro_ocun_1761, retro_ocun_291, retro_ocun_298, retro_ocun_548, retro_ocun_623, retro_ocun_856, retro_ocun_978,
Otolemur garnettii ENSOGAG00000007265 possible_ortholog 3 retrogenes
retro_ogar_220, retro_ogar_257, retro_ogar_32,
Pongo abelii ENSPPYG00000025915 ortholog_one2one 6 retrogenes
retro_pabe_1889, retro_pabe_1971, retro_pabe_2930, retro_pabe_3507, retro_pabe_71, retro_pabe_94,
Pan troglodytes ENSPTRG00000004361 ortholog_one2one 10 retrogenes
retro_ptro_1368, retro_ptro_1494, retro_ptro_1579, retro_ptro_1722, retro_ptro_1935, retro_ptro_2291, retro_ptro_2411, retro_ptro_245, retro_ptro_2918, retro_ptro_536,
Sorex araneus ENSSARG00000002284 ortholog_one2one 4 retrogenes
retro_sara_21, retro_sara_212, retro_sara_43, retro_sara_542,
Tupaia belangeri ENSTBEG00000010244 ortholog_one2one 16 retrogenes
retro_tbel_1592, retro_tbel_1823, retro_tbel_1849, retro_tbel_22, retro_tbel_2651, retro_tbel_2744, retro_tbel_3106, retro_tbel_3107, retro_tbel_3499, retro_tbel_374, retro_tbel_3871, retro_tbel_3877, retro_tbel_4239, retro_tbel_4434, retro_tbel_444, retro_tbel_4464,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_154 82.20 94.40
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2. retro_tsyr_358 96.77 98.40
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3. retro_tsyr_414 80.67 94.40
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4. retro_tsyr_428 81.89 100.00
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5. retro_tsyr_570 67.54 90.40
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6. retro_tsyr_859 83.33 95.20
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7. retro_tsyr_873 88.00 100.00
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8. retro_tsyr_1050 77.95 100.00
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9. retro_tsyr_1098 87.20 100.00
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10. retro_tsyr_1125 84.43 96.80
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11. retro_tsyr_1230 83.96 84.80
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12. retro_tsyr_1252 95.28 100.00
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13. retro_tsyr_1454 93.60 100.00
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14. retro_tsyr_1558 79.67 96.00
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15. retro_tsyr_2081 74.78 91.20
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Download FASTA sequences of all ENSTSYG00000005422 retrocopies