Parental gene: | PPP1CC, ENSTBEG00000013852 |
| Aliases: | None |
| Description: | protein phosphatase 1, catalytic subunit, gamma isozyme [Source:HGNC Symbol;Acc:9283] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_1338:279223..312683(-) |
>ENSTBEG00000013852
ATGGCGGATATAGATAAACTCAACATCGACAGCATCATCCAACGTCTGCTGGAAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGTGATATTCATGGGCAATACTATGACTTGCTTCGACTTTTTGAATACGGTGGT
TTCCCACCAGAAAGCAACTACCTGTTTCTTGGGGACTATGTGGACAGGGGGAAGCAGTCATTGGAAACCATCTGCCTCTT
ACTGGCCTACAAAATCAAATACCCCGAGAATTTCTTTCTTCTCAGAGGGAACCATGAATGTGCCAGCATCAATAGAATTT
ACGGATTTTATGATGAGTGTAAAAGAAGGTACAACATTAAACTATGGAAAACTTTCACAGACTGTTTTAACTGTTTACCG
ATAGCAGCTATCGTCGATGAGAAAATATTCTGCTGTCATGGAGGTTTATCACCAGATCTTCAATCTATGGAGCAGATTCG
GCGAATTATGCGACCAACCGATGTGCCAGATCAAGGTCTTCTTTGTGATCTTTTGTGGTCTGACCCCGATAAAGATGTCT
TAGGCTGGGGTGAAAATGACAGAGGAGTGTCCTTCACATTTGGTGCAGAAGTGGTTGCAAAATTTCTCCATAAGCATGAT
TTGGATCTTATATGTAGAGCCCATCAGGTGGTTGAAGATGGATATGAATTTTTTGCAAAGAGGCAGTTGGTTACTCTGTT
TTCTGCACCCAATTATTGTGGAGAATTTGACAATGCAGGTGCCATGATGAGTGTGGACGAAACACTAATGTGTTCTTTTC
AGATTTTAAAGCCTGCAGAGAAAAAGAAGCCGAATGCCACAAGACCTGTAACACCTCCAAGGGNNNNNNNNNNNNNNNNN
NNNNNNATTCAGAAAGCTTCAAATTATAGAAACAATACTGTTCTGTACGAGTGA
ATGGCGGATATAGATAAACTCAACATCGACAGCATCATCCAACGTCTGCTGGAAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGTGATATTCATGGGCAATACTATGACTTGCTTCGACTTTTTGAATACGGTGGT
TTCCCACCAGAAAGCAACTACCTGTTTCTTGGGGACTATGTGGACAGGGGGAAGCAGTCATTGGAAACCATCTGCCTCTT
ACTGGCCTACAAAATCAAATACCCCGAGAATTTCTTTCTTCTCAGAGGGAACCATGAATGTGCCAGCATCAATAGAATTT
ACGGATTTTATGATGAGTGTAAAAGAAGGTACAACATTAAACTATGGAAAACTTTCACAGACTGTTTTAACTGTTTACCG
ATAGCAGCTATCGTCGATGAGAAAATATTCTGCTGTCATGGAGGTTTATCACCAGATCTTCAATCTATGGAGCAGATTCG
GCGAATTATGCGACCAACCGATGTGCCAGATCAAGGTCTTCTTTGTGATCTTTTGTGGTCTGACCCCGATAAAGATGTCT
TAGGCTGGGGTGAAAATGACAGAGGAGTGTCCTTCACATTTGGTGCAGAAGTGGTTGCAAAATTTCTCCATAAGCATGAT
TTGGATCTTATATGTAGAGCCCATCAGGTGGTTGAAGATGGATATGAATTTTTTGCAAAGAGGCAGTTGGTTACTCTGTT
TTCTGCACCCAATTATTGTGGAGAATTTGACAATGCAGGTGCCATGATGAGTGTGGACGAAACACTAATGTGTTCTTTTC
AGATTTTAAAGCCTGCAGAGAAAAAGAAGCCGAATGCCACAAGACCTGTAACACCTCCAAGGGNNNNNNNNNNNNNNNNN
NNNNNNATTCAGAAAGCTTCAAATTATAGAAACAATACTGTTCTGTACGAGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ciona intestinalis | ENSCING00000004542 | ortholog_many2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009147 | possible_ortholog | 7 retrogenes | |
| Echinops telfairi | ENSETEG00000015721 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010661 | possible_ortholog | 2 retrogenes | |
| Sorex araneus | ENSSARG00000000571 | possible_ortholog | 1 retrogene | |
| Drosophila melanogaster | FBgn0003134 | ortholog_many2many | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_1710 | 83.70 | 54.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_2116 | 72.59 | 74.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_2311 | 74.30 | 72.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tbel_4450 | 83.33 | 74.48 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000013852 retrocopies