Parental gene:

RPL18A, ENSTBEG00000010488

Aliases:None
Description:ribosomal protein L18a [Source:HGNC Symbol;Acc:10311]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:scaffold_75056:3402..4292(+)


>ENSTBEG00000010488
GTGTTTGAGAAGTCCCCGCTGCGGGTGAAGAACTTCGGCATCTGGCTGCGCTACGACTCCCGCAGCGGCACGCACAACAT
GTACCGCGAGTACCGGGACCTCACCACGGCCGGCGCCGTCACCCAGTGCTACCGCGACATGGGCGCCCGGCACCGCGCCC
GCGCCCACTCCATCCAGATCATGAAGGTGGAGGAGATCGCGGCCAGCAAGTGCCGCCGGCCGGCAGTCAAGCAGTTCCAC
GACTCCAAGATCAAGTTCCCGCTGCCCCACCGCGTCCTGCGGCGCCAGCACAAGCCTCGTTTCACCACCAAGAGGCCCAA
CACCTTCTTCTAG

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000003125 ortholog_one2one 1 retrogene
retro_acar_86,
Bos taurus ENSBTAG00000015831 possible_ortholog 5 retrogenes
retro_btau_145, retro_btau_1586, retro_btau_842, retro_btau_917, retro_btau_922,
Canis familiaris ENSCAFG00000015122 possible_ortholog 1 retrogene
retro_cfam_231,
Callithrix jacchus ENSCJAG00000014006 possible_ortholog 7 retrogenes
retro_cjac_1628, retro_cjac_2814, retro_cjac_3192, retro_cjac_3906, retro_cjac_4134, retro_cjac_441, retro_cjac_642,
Cavia porcellus ENSCPOG00000015205 possible_ortholog 1 retrogene
retro_cpor_1478,
Equus caballus ENSECAG00000015258 possible_ortholog 1 retrogene
retro_ecab_745,
Gorilla gorilla ENSGGOG00000002870 possible_ortholog 8 retrogenes
retro_ggor_1215, retro_ggor_1680, retro_ggor_1868, retro_ggor_1933, retro_ggor_195, retro_ggor_227, retro_ggor_2775, retro_ggor_2940,
Macropus eugenii ENSMEUG00000003228 ortholog_one2many 2 retrogenes
retro_meug_36, retro_meug_49,
Macaca mulatta ENSMMUG00000028844 ortholog_one2many 6 retrogenes
retro_mmul_1416, retro_mmul_1591, retro_mmul_2233, retro_mmul_2547, retro_mmul_292, retro_mmul_364,
Monodelphis domestica ENSMODG00000019167 ortholog_one2one 2 retrogenes
retro_mdom_349, retro_mdom_680,
Mustela putorius furo ENSMPUG00000015786 possible_ortholog 4 retrogenes
retro_mputfur_1007, retro_mputfur_1189, retro_mputfur_1574, retro_mputfur_457,
Mus musculus ENSMUSG00000045128 possible_ortholog 8 retrogenes
retro_mmus_1606, retro_mmus_260, retro_mmus_2910, retro_mmus_2924, retro_mmus_326, retro_mmus_346, retro_mmus_937, retro_mmus_951,
Pongo abelii ENSPPYG00000009725 possible_ortholog 10 retrogenes
retro_pabe_1200, retro_pabe_1319, retro_pabe_1620, retro_pabe_2239, retro_pabe_2302, retro_pabe_3680, retro_pabe_3717, retro_pabe_3802, retro_pabe_482, retro_pabe_487,
Pan troglodytes ENSPTRG00000010686 possible_ortholog 3 retrogenes
retro_ptro_1078, retro_ptro_1803, retro_ptro_27,
Rattus norvegicus ENSRNOG00000018795 possible_ortholog 6 retrogenes
retro_rnor_108, retro_rnor_1655, retro_rnor_2279, retro_rnor_2362, retro_rnor_2821, retro_rnor_888,
Sarcophilus harrisii ENSSHAG00000000406 ortholog_one2one 3 retrogenes
retro_shar_435, retro_shar_474, retro_shar_706,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_635 70.54 100.00
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2. retro_tbel_919 69.23 80.91
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3. retro_tbel_2865 64.60 100.00
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4. retro_tbel_2925 67.26 100.00
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Download FASTA sequences of all ENSTBEG00000010488 retrocopies