Parental gene:

ENSSTOG00000028142

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393305.1:8730242..8755587(-)


>ENSSTOG00000028142
ATGAGCGATAACGATGACATCGAGGTGGAGAGCGACGAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCA
TCATAATGCACTGGAACGAAAACGCAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCGTCACTCC
AAGGAGAGAAGGCATCCCGGGCCCAAATCCTAGACAAAGCCACAGAGTATATCCAGTATATGCGAAGGAAAAACCACACG
CACCAGCAAGATATCGATGACCTCAAGCGGCAGAATGCTCTTCTGGAGCAGCAAGTCCGTGCACTGGAGAAAGCGAGGTC
GAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAACAGCCTCTACACCAACGCCAAGGGCAGCACCATCTCTGCCT
TCGATGGGGGCTCTGACTCCAGCTCAGAGTCAGAGCCTGAAGAGCCCCAAAGCAGGAAGAAACTCCGGATGGAGGCCAGC
TAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003472 ortholog_one2many 2 retrogenes
retro_amel_1261, retro_amel_1606,
Canis familiaris ENSCAFG00000016212 ortholog_one2many 2 retrogenes
retro_cfam_1179, retro_cfam_1325,
Callithrix jacchus ENSCJAG00000019702 ortholog_one2many 2 retrogenes
retro_cjac_2057, retro_cjac_2556,
Cavia porcellus ENSCPOG00000010172 ortholog_one2many 1 retrogene
retro_cpor_710,
Erinaceus europaeus ENSEEUG00000003973 ortholog_one2many 3 retrogenes
retro_eeur_216, retro_eeur_344, retro_eeur_37,
Echinops telfairi ENSETEG00000002967 ortholog_one2many 1 retrogene
retro_etel_1294,
Felis catus ENSFCAG00000010347 ortholog_one2many 1 retrogene
retro_fcat_278,
Macaca mulatta ENSMMUG00000004341 ortholog_one2many 1 retrogene
retro_mmul_1648,
Mustela putorius furo ENSMPUG00000006859 ortholog_one2many 3 retrogenes
retro_mputfur_1218, retro_mputfur_1615, retro_mputfur_192,
Mus musculus ENSMUSG00000059436 ortholog_one2many 8 retrogenes
retro_mmus_2891, retro_mmus_2892, retro_mmus_2893, retro_mmus_2894, retro_mmus_2991, retro_mmus_2992, retro_mmus_2993, retro_mmus_2994,
Nomascus leucogenys ENSNLEG00000014373 ortholog_one2many 1 retrogene
retro_nleu_1122,
Ochotona princeps ENSOPRG00000016245 ortholog_one2many 1 retrogene
retro_opri_945,
Pongo abelii ENSPPYG00000005911 ortholog_one2many 1 retrogene
retro_pabe_3097,
Rattus norvegicus ENSRNOG00000008049 ortholog_one2many 3 retrogenes
retro_rnor_1653, retro_rnor_1877, retro_rnor_2369,
Tupaia belangeri ENSTBEG00000012645 ortholog_one2many 1 retrogene
retro_tbel_3407,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_42 81.21 93.12
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSTOG00000028142 retrocopies