Parental gene:

CLNS1A, ENSSTOG00000027980

Aliases:None
Description:chloride channel, nucleotide-sensitive, 1A [Source:HGNC Symbol;Acc:2080]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393308.1:6242728..6265733(-)


>ENSSTOG00000027980
ATGAGCTTCCTAAAGAGTTTCCCGCCGCCGGGGCAGGATGAGGGGCTTCGGCAACAGCAGCCAGATACAGAGGCTGTGCT
GAACGGAAAGGGCCTCGGTATCGGCACTCTTTACATCGCGGAGAGCCGCCTGTCTTGGTTAGATGGTTCTGGATTAGGAT
TCTCACTGGAATACCCCACCATTAGTTTACATGCGGTGTCCAGGGACCTAAATGCTTATCCTCGAGAGCATTTGTATGTT
ATGGTGAATGCCAAATTTGGAGAAGAATCAAAAGAATCTCTTGCTGATGAAGAGGAGGAAGACAGTGATGATGATGTTGA
ACCTATTACTGAATTTAGATTTGTGCCTAGTGATAAATCAGCATTGGAGGTGATGTTCACTGCAATGTGTGAATGCCAGG
CTTTGCATCCAGATCCTGAGGACGAAGACTCAGATGATTATGATGGAGAAGAATATGATGTGGAAGCACATGAACAAGGG
CAGGGGGATATTCCTACATTTTATACCTATGAAGAAGGATTATCCCATTTAACAGCAGAAGGGCAAGCTACACTGGAGAG
ATTAGAAGGAATGCTTTCTCAGTCTGTGAGCAGCCAGTATAACATGGCTGGGGTCCGGACGGAAGATTCAGTAAGAGATT
ATGAAGATGGCATGGAGGTAGATACCACACCAACAGTTGCTGGACAATTTGAGGATGCGGATGTTGATCACTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019930 ortholog_one2one 1 retrogene
retro_btau_376,
Canis familiaris ENSCAFG00000004900 possible_ortholog 6 retrogenes
retro_cfam_1112, retro_cfam_1448, retro_cfam_255, retro_cfam_327, retro_cfam_720, retro_cfam_727,
Callithrix jacchus ENSCJAG00000014927 ortholog_one2one 1 retrogene
retro_cjac_4085,
Cavia porcellus ENSCPOG00000005260 ortholog_one2many 1 retrogene
retro_cpor_67,
Felis catus ENSFCAG00000026321 possible_ortholog 1 retrogene
retro_fcat_736,
Homo sapiens ENSG00000074201 ortholog_one2one 2 retrogenes
retro_hsap_3010, retro_hsap_3595,
Gorilla gorilla ENSGGOG00000003091 ortholog_one2one 1 retrogene
retro_ggor_2084,
Macropus eugenii ENSMEUG00000005935 ortholog_one2one 4 retrogenes
retro_meug_1825, retro_meug_2097, retro_meug_783, retro_meug_929,
Mus musculus ENSMUSG00000025439 ortholog_one2one 1 retrogene
retro_mmus_1984,
Nomascus leucogenys ENSNLEG00000016699 ortholog_one2one 2 retrogenes
retro_nleu_300, retro_nleu_756,
Oryctolagus cuniculus ENSOCUG00000024393 ortholog_one2many 1 retrogene
retro_ocun_1303,
Pongo abelii ENSPPYG00000003712 ortholog_one2one 1 retrogene
retro_pabe_2494,
Sorex araneus ENSSARG00000009460 ortholog_one2one 2 retrogenes
retro_sara_247, retro_sara_682,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_239 72.66 52.32
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2. retro_itri_319 89.54 99.58
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3. retro_itri_490 89.32 86.50
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Download FASTA sequences of all ENSSTOG00000027980 retrocopies